Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00079)

Target Name	Heterogeneous nuclear ribonucleoprotein L like (HNRNPLL)
Synonyms	HNRPLL Click to Show/Hide
Gene Name	HNRNPLL
Sequence	MSSSSSSPRETYEEDREYESQAKRLKTEEGEIDYSAEEGENRREATPRGGGDGGGGGRSFSQPEAGGSHHKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADEPVYIAGQQAFFNYSTSKRITRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAALNGADIYAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSFRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHSVVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYTLKLCFSTSSHL Click to Show/Hide
Function	RNA-binding protein that functions as a regulator of alternative splicing for multiple target mRNAs, including PTPRC/CD45 and STAT5A. Required for alternative splicing of PTPRC. Click to Show/Hide
Gene ID	92906
HGNC ID	HGNC:25127
Ensembl Gene ID	ENSG00000143889
KEGG ID	hsa:92906
Chromosomal Location	2p22.1

RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00079)

Heterogeneous nuclear ribonucleoprotein L like (HNRNPLL)

Adenosine-to-Inosine editing (A-to-I)

In total 2 m6A sequence/site(s) in this target gene
mod ID: A2ISITE009525		Click to Show/Hide the Full List
mod site	chr2:38567388-38567389:-		[1]
Sequence	GCACTGTGACTCACGCCTGTAATCCCAGCACTTTGGGAGAC
Transcript ID List	ENST00000272249.7; ENST00000409636.5; ENST00000358367.8; rmsk_514887; ENST00000409328.5; ENST00000608859.5; ENST00000449105.8; ENST00000378915.7
External Link	RMBase: RNA-editing_site_75570
mod ID: A2ISITE009526		Click to Show/Hide the Full List
mod site	chr2:38582873-38582874:-		[1]
Sequence	TTGATTTTTTTTTTTTTTTTAAGATGGAGTTTTGCTTTTTG
Transcript ID List	ENST00000410076.5; ENST00000409636.5; ENST00000358367.8; ENST00000378915.7; ENST00000272249.7; ENST00000449105.8; ENST00000488099.1; ENST00000608859.5; ENST00000409328.5
External Link	RMBase: RNA-editing_site_75571

5-methylcytidine (m5C)

In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE002291		Click to Show/Hide the Full List
mod site	chr2:38585674-38585675:-
Sequence	CAACAAAGTTCTTCTGCTCTCAATTCAGAATCCGCTTTATC
Cell/Tissue List	T24
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000449105.8; ENST00000409636.5; ENST00000488099.1; ENST00000358367.8; ENST00000410076.5; ENST00000608859.5; ENST00000409328.5; ENST00000425682.1; ENST00000272249.7; ENST00000378915.7
External Link	RMBase: m5C_site_26354
mod ID: M5CSITE002292		Click to Show/Hide the Full List
mod site	chr2:38602805-38602806:-		[2]
Sequence	TCCTCCCGGGGCGCCCCCCTCAGTCCGTCCGCGCTTCTCAG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000608859.5; ENST00000449105.8; ENST00000409328.5; ENST00000409636.5; ENST00000410076.5; ENST00000358367.8; ENST00000498516.1
External Link	RMBase: m5C_site_26355

N6-methyladenosine (m6A)

In total 63 m6A sequence/site(s) in this target gene
mod ID: M6ASITE044088		Click to Show/Hide the Full List
mod site	chr2:38562165-38562166:-		[3]
Sequence	ATGAAGTTTGCTTTGTGAATACTCTCTCTTTCCTTAGCCTT
Motif Score	2.53247619
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000409636.5; ENST00000449105.8
External Link	RMBase: m6A_site_469053
mod ID: M6ASITE044089		Click to Show/Hide the Full List
mod site	chr2:38563513-38563514:-		[4]
Sequence	GGAGATTTTATAAAGTTATAACAATGAGTTAATGTGTTCAT
Motif Score	2.168095238
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000409636.5; ENST00000608859.5; ENST00000378915.7; ENST00000358367.8; ENST00000449105.8; ENST00000272249.7
External Link	RMBase: m6A_site_469054
mod ID: M6ASITE044090		Click to Show/Hide the Full List
mod site	chr2:38563559-38563560:-		[4]
Sequence	GTCACTGTCCATTTGTATTGACATGCCTCTGTTTCTAGTCC
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000608859.5; ENST00000409636.5; ENST00000358367.8; ENST00000272249.7; ENST00000378915.7; ENST00000449105.8
External Link	RMBase: m6A_site_469055
mod ID: M6ASITE044091		Click to Show/Hide the Full List
mod site	chr2:38564051-38564052:-		[4]
Sequence	AAGATCCTGTTCTGTAATAAACATATTTTGCCTTGAGTAAA
Motif Score	2.20572619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000449105.8; ENST00000409328.5; ENST00000608859.5; ENST00000358367.8; ENST00000409636.5; ENST00000378915.7; ENST00000272249.7
External Link	RMBase: m6A_site_469056
mod ID: M6ASITE044092		Click to Show/Hide the Full List
mod site	chr2:38564127-38564128:-		[4]
Sequence	TTTATTACAATTTCAAAGCTACACTTCATTAAAAAAAAATC
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000449105.8; ENST00000409328.5; ENST00000409636.5; ENST00000608859.5; ENST00000272249.7; ENST00000358367.8; ENST00000378915.7
External Link	RMBase: m6A_site_469057
mod ID: M6ASITE044093		Click to Show/Hide the Full List
mod site	chr2:38564141-38564142:-		[4]
Sequence	AATTTATGTTCACCTTTATTACAATTTCAAAGCTACACTTC
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000608859.5; ENST00000358367.8; ENST00000409636.5; ENST00000449105.8; ENST00000409328.5; ENST00000272249.7; ENST00000378915.7
External Link	RMBase: m6A_site_469058
mod ID: M6ASITE044094		Click to Show/Hide the Full List
mod site	chr2:38564198-38564199:-		[4]
Sequence	CATTGAAGCTTTGCTTTTCTACATCATCCCATTTATAAGAA
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000272249.7; ENST00000608859.5; ENST00000409636.5; ENST00000378915.7; ENST00000449105.8; ENST00000358367.8; ENST00000409328.5
External Link	RMBase: m6A_site_469059
mod ID: M6ASITE044095		Click to Show/Hide the Full List
mod site	chr2:38564219-38564220:-		[4]
Sequence	CAGATGGTTCCAATCCCTATACATTGAAGCTTTGCTTTTCT
Motif Score	2.110482143
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000608859.5; ENST00000449105.8; ENST00000409636.5; ENST00000272249.7; ENST00000409328.5; ENST00000378915.7; ENST00000358367.8
External Link	RMBase: m6A_site_469060
mod ID: M6ASITE044096		Click to Show/Hide the Full List
mod site	chr2:38568252-38568253:-		[5]
Sequence	TATTAGAATGGGAGTGCAAAACTGATGCAGTAGAAGCCCTT
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000441689.1; ENST00000608859.5; ENST00000409328.5; ENST00000409636.5; ENST00000358367.8; ENST00000449105.8; ENST00000272249.7; ENST00000378915.7
External Link	RMBase: m6A_site_469061
mod ID: M6ASITE044097		Click to Show/Hide the Full List
mod site	chr2:38568285-38568286:-		[5]
Sequence	TTGTTTTAGCTTCAGCCAAAACACTTTCTGGGCTATTAGAA
Motif Score	2.20572619
Cell/Tissue List	HeLa; hESC-HEK293T
Seq Type List	m6A-seq; MAZTER-seq
Transcript ID List	ENST00000272249.7; ENST00000409328.5; ENST00000358367.8; ENST00000378915.7; ENST00000608859.5; ENST00000409636.5; ENST00000449105.8; ENST00000441689.1
External Link	RMBase: m6A_site_469062
mod ID: M6ASITE044098		Click to Show/Hide the Full List
mod site	chr2:38569143-38569144:-		[5]
Sequence	CATTGTGTGTCACAGAAGAGACCTTCACAAAGGTAGGCACT
Motif Score	2.876744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000358367.8; ENST00000272249.7; ENST00000608859.5; ENST00000441689.1; ENST00000409636.5; ENST00000409328.5; ENST00000449105.8; ENST00000378915.7
External Link	RMBase: m6A_site_469063
mod ID: M6ASITE044099		Click to Show/Hide the Full List
mod site	chr2:38569233-38569234:-		[4]
Sequence	TGAGCAAAAATAATCGCTTTACAAGTGCTGGCCAAGCATCT
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000441689.1; ENST00000272249.7; ENST00000449105.8; ENST00000378915.7; ENST00000358367.8; ENST00000608859.5; ENST00000409636.5; ENST00000409328.5
External Link	RMBase: m6A_site_469064
mod ID: M6ASITE044100		Click to Show/Hide the Full List
mod site	chr2:38569268-38569269:-		[4]
Sequence	GGAGGATGGTACCAGCAGCTACAAAGATTTTGCAATGAGCA
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000441689.1; ENST00000272249.7; ENST00000378915.7; ENST00000608859.5; ENST00000358367.8; ENST00000409636.5; ENST00000409328.5; ENST00000449105.8
External Link	RMBase: m6A_site_469065
mod ID: M6ASITE044101		Click to Show/Hide the Full List
mod site	chr2:38569321-38569322:-		[4]
Sequence	ATCTTTAGCGTGTCTAAACAACATTCAGTTGTTCCAAGTCA
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000378915.7; ENST00000409636.5; ENST00000409328.5; ENST00000449105.8; ENST00000441689.1; ENST00000608859.5; ENST00000358367.8; ENST00000272249.7
External Link	RMBase: m6A_site_469066
mod ID: M6ASITE044102		Click to Show/Hide the Full List
mod site	chr2:38569324-38569325:-		[4]
Sequence	ACAATCTTTAGCGTGTCTAAACAACATTCAGTTGTTCCAAG
Motif Score	2.20572619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000409328.5; ENST00000272249.7; ENST00000409636.5; ENST00000378915.7; ENST00000441689.1; ENST00000608859.5; ENST00000449105.8; ENST00000358367.8
External Link	RMBase: m6A_site_469067
mod ID: M6ASITE044103		Click to Show/Hide the Full List
mod site	chr2:38569814-38569815:-		[5]
Sequence	GTCAAATTATTTGGGAAAAGACTTAATGTTTGGTAATTATC
Motif Score	3.319380952
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000449105.8; ENST00000358367.8; ENST00000272249.7; ENST00000378915.7; ENST00000409636.5; ENST00000441689.1; ENST00000608859.5; ENST00000409328.5
External Link	RMBase: m6A_site_469068
mod ID: M6ASITE044104		Click to Show/Hide the Full List
mod site	chr2:38569849-38569850:-		[4]
Sequence	ATGCTGTAGAAAGAGCTGTCACACACCTTAATAATGTCAAA
Motif Score	2.047297619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000358367.8; ENST00000449105.8; ENST00000272249.7; ENST00000409636.5; ENST00000378915.7; ENST00000608859.5; ENST00000409328.5
External Link	RMBase: m6A_site_469069
mod ID: M6ASITE044105		Click to Show/Hide the Full List
mod site	chr2:38569897-38569898:-		[6]
Sequence	TTATGAAGACCATTCCTGGTACAGCACTGGTAGAAATGGGT
Motif Score	2.856142857
Cell/Tissue List	HEK293
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000409636.5; ENST00000358367.8; ENST00000449105.8; ENST00000272249.7; ENST00000409328.5; ENST00000378915.7; ENST00000608859.5
External Link	RMBase: m6A_site_469070
mod ID: M6ASITE044106		Click to Show/Hide the Full List
mod site	chr2:38569909-38569910:-		[5]
Sequence	TACAGGTAAAATTTATGAAGACCATTCCTGGTACAGCACTG
Motif Score	2.876744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000358367.8; ENST00000378915.7; ENST00000608859.5; ENST00000409328.5; ENST00000409636.5; ENST00000449105.8; ENST00000272249.7
External Link	RMBase: m6A_site_469071
mod ID: M6ASITE044107		Click to Show/Hide the Full List
mod site	chr2:38573275-38573276:-		[4]
Sequence	GTTGTAATGGTTAGTGGATTACATCAACTAAAAATGAATTG
Motif Score	2.07285119
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000378915.7; ENST00000449105.8; ENST00000358367.8; ENST00000272249.7; ENST00000409328.5; ENST00000608859.5; ENST00000409636.5
External Link	RMBase: m6A_site_469072
mod ID: M6ASITE044108		Click to Show/Hide the Full List
mod site	chr2:38573324-38573325:-		[6]
Sequence	ACCACAGGCTTCTTCCTCTTACATGCATGGAGGAAATCCCT
Motif Score	2.07285119
Cell/Tissue List	kidney; HEK293T; hESC-HEK293T
Seq Type List	m6A-REF-seq; DART-seq; MAZTER-seq
Transcript ID List	ENST00000272249.7; ENST00000378915.7; ENST00000409328.5; ENST00000608859.5; ENST00000449105.8; ENST00000409636.5; ENST00000358367.8
External Link	RMBase: m6A_site_469073
mod ID: M6ASITE044109		Click to Show/Hide the Full List
mod site	chr2:38573362-38573363:-		[5]
Sequence	GGCTCTCGAGATACACCTGAACTTGTTGCTTATCCATTACC
Motif Score	3.373380952
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000378915.7; ENST00000358367.8; ENST00000608859.5; ENST00000409328.5; ENST00000409636.5; ENST00000272249.7; ENST00000449105.8
External Link	RMBase: m6A_site_469074
mod ID: M6ASITE044110		Click to Show/Hide the Full List
mod site	chr2:38577473-38577474:-		[5]
Sequence	GAACACCCTTCTTCGTTTAGACATGATGGCTATGGTAAGTT
Motif Score	2.897386905
Cell/Tissue List	HeLa; hESC-HEK293T
Seq Type List	m6A-seq; MAZTER-seq
Transcript ID List	ENST00000449105.8; ENST00000608859.5; ENST00000409328.5; ENST00000378915.7; ENST00000358367.8; ENST00000409636.5; ENST00000272249.7
External Link	RMBase: m6A_site_469075
mod ID: M6ASITE044111		Click to Show/Hide the Full List
mod site	chr2:38577491-38577492:-		[5]
Sequence	AGACAAGCCATTTTGGGAGAACACCCTTCTTCGTTTAGACA
Motif Score	2.951386905
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000409636.5; ENST00000272249.7; ENST00000409328.5; ENST00000608859.5; ENST00000358367.8; ENST00000378915.7; ENST00000449105.8
External Link	RMBase: m6A_site_469076
mod ID: M6ASITE044112		Click to Show/Hide the Full List
mod site	chr2:38577509-38577510:-		[5]
Sequence	AGAGGAAAGGGTCGCCAGAGACAAGCCATTTTGGGAGAACA
Motif Score	2.897386905
Cell/Tissue List	HeLa; hESC-HEK293T
Seq Type List	m6A-seq; MAZTER-seq
Transcript ID List	ENST00000358367.8; ENST00000409636.5; ENST00000378915.7; ENST00000608859.5; ENST00000449105.8; ENST00000409328.5; ENST00000272249.7
External Link	RMBase: m6A_site_469077
mod ID: M6ASITE044113		Click to Show/Hide the Full List
mod site	chr2:38577979-38577980:-		[5]
Sequence	TGTTGTTGGCTTATGCTGAAACTTCTTGAAAGAAGCCCACT
Motif Score	2.627720238
Cell/Tissue List	HeLa; Huh7
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000449105.8; ENST00000409328.5; ENST00000409636.5; ENST00000272249.7; ENST00000358367.8; ENST00000608859.5; ENST00000378915.7
External Link	RMBase: m6A_site_469078
mod ID: M6ASITE044114		Click to Show/Hide the Full List
mod site	chr2:38581154-38581155:-		[7]
Sequence	TTAATTGGCAAATAACCAGGACCAGTTTATTAACAGGTCTT
Motif Score	3.622404762
Cell/Tissue List	Huh7
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000608859.5; ENST00000272249.7; ENST00000449105.8; ENST00000410076.5; ENST00000378915.7; ENST00000409636.5; ENST00000409328.5; ENST00000358367.8
External Link	RMBase: m6A_site_469079
mod ID: M6ASITE044115		Click to Show/Hide the Full List
mod site	chr2:38581242-38581243:-		[8]
Sequence	TTTCCACTAACGGAAACTAGACTTCATCTGCAATGTTGTAA
Motif Score	3.319380952
Cell/Tissue List	HEK293T; HepG2; Huh7; MSC
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000608859.5; ENST00000409636.5; ENST00000272249.7; ENST00000449105.8; ENST00000410076.5; ENST00000358367.8; ENST00000409328.5; ENST00000378915.7
External Link	RMBase: m6A_site_469080
mod ID: M6ASITE044116		Click to Show/Hide the Full List
mod site	chr2:38581247-38581248:-		[8]
Sequence	AAGACTTTCCACTAACGGAAACTAGACTTCATCTGCAATGT
Motif Score	2.627720238
Cell/Tissue List	HEK293T; HepG2; Huh7; MSC
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000409636.5; ENST00000409328.5; ENST00000378915.7; ENST00000358367.8; ENST00000608859.5; ENST00000449105.8; ENST00000272249.7; ENST00000410076.5
External Link	RMBase: m6A_site_469081
mod ID: M6ASITE044117		Click to Show/Hide the Full List
mod site	chr2:38581264-38581265:-		[8]
Sequence	TTTCAGTTGTAGAATTTAAGACTTTCCACTAACGGAAACTA
Motif Score	3.319380952
Cell/Tissue List	HEK293T; HepG2; fibroblasts; A549; Huh7; MSC; TREX
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000410076.5; ENST00000358367.8; ENST00000378915.7; ENST00000409636.5; ENST00000272249.7; ENST00000409328.5; ENST00000608859.5; ENST00000449105.8
External Link	RMBase: m6A_site_469082
mod ID: M6ASITE044118		Click to Show/Hide the Full List
mod site	chr2:38581338-38581339:-		[5]
Sequence	TGGGATGAACACCATGATAGACTGTGCCCATTTATACAAGT
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000378915.7; ENST00000272249.7; ENST00000409328.5; ENST00000409636.5; ENST00000358367.8; ENST00000449105.8; ENST00000410076.5; ENST00000608859.5
External Link	RMBase: m6A_site_469083
mod ID: M6ASITE044119		Click to Show/Hide the Full List
mod site	chr2:38581350-38581351:-		[5]
Sequence	TTCAGAATTGCATGGGATGAACACCATGATAGACTGTGCCC
Motif Score	2.951386905
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000608859.5; ENST00000358367.8; ENST00000409328.5; ENST00000272249.7; ENST00000409636.5; ENST00000378915.7; ENST00000449105.8; ENST00000410076.5
External Link	RMBase: m6A_site_469084
mod ID: M6ASITE044120		Click to Show/Hide the Full List
mod site	chr2:38581384-38581385:-		[5]
Sequence	CCCCAAGTTTTTAAAGGAGGACACTTAACAGTACTTCAGAA
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000272249.7; ENST00000358367.8; ENST00000409636.5; ENST00000378915.7; ENST00000608859.5; ENST00000409328.5; ENST00000410076.5; ENST00000449105.8
External Link	RMBase: m6A_site_469085
mod ID: M6ASITE044121		Click to Show/Hide the Full List
mod site	chr2:38581444-38581445:-		[5]
Sequence	AAGCCCTCTGAAAAACTCAGACTCGCAATTCACCTTGACTG
Motif Score	3.319380952
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000378915.7; ENST00000449105.8; ENST00000608859.5; ENST00000358367.8; ENST00000272249.7; ENST00000409636.5; ENST00000410076.5; ENST00000409328.5
External Link	RMBase: m6A_site_469086
mod ID: M6ASITE044122		Click to Show/Hide the Full List
mod site	chr2:38581450-38581451:-		[5]
Sequence	AGCAAAAAGCCCTCTGAAAAACTCAGACTCGCAATTCACCT
Motif Score	2.627720238
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000410076.5; ENST00000272249.7; ENST00000409636.5; ENST00000358367.8; ENST00000608859.5; ENST00000449105.8; ENST00000378915.7; ENST00000409328.5
External Link	RMBase: m6A_site_469087
mod ID: M6ASITE044123		Click to Show/Hide the Full List
mod site	chr2:38581517-38581518:-		[5]
Sequence	GGCATTAAGAAGGATAGAGGACTCCAGCAGGCTGACTCTAC
Motif Score	4.065041667
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4; MM6
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000358367.8; ENST00000409328.5; ENST00000272249.7; ENST00000449105.8; ENST00000410076.5; ENST00000409636.5; ENST00000608859.5; ENST00000378915.7
External Link	RMBase: m6A_site_469088
mod ID: M6ASITE044124		Click to Show/Hide the Full List
mod site	chr2:38581558-38581559:-		[5]
Sequence	ACTGCTTCTCTATGGAAAGGACTTTCCCCCAAGCTGGACGA
Motif Score	4.065041667
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; CD8T; Huh7; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000409636.5; ENST00000410076.5; ENST00000449105.8; ENST00000409328.5; ENST00000272249.7; ENST00000378915.7; ENST00000358367.8; ENST00000608859.5
External Link	RMBase: m6A_site_469089
mod ID: M6ASITE044125		Click to Show/Hide the Full List
mod site	chr2:38581586-38581587:-		[5]
Sequence	ATATTCCTTACAAACTGCAAACTTGCACACTGCTTCTCTAT
Motif Score	2.627720238
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000409328.5; ENST00000410076.5; ENST00000272249.7; ENST00000409636.5; ENST00000449105.8; ENST00000378915.7; ENST00000358367.8; ENST00000608859.5
External Link	RMBase: m6A_site_469090
mod ID: M6ASITE044126		Click to Show/Hide the Full List
mod site	chr2:38581593-38581594:-		[5]
Sequence	ATTCAGAATATTCCTTACAAACTGCAAACTTGCACACTGCT
Motif Score	2.627720238
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; CD8T; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000378915.7; ENST00000272249.7; ENST00000409636.5; ENST00000410076.5; ENST00000449105.8; ENST00000358367.8; ENST00000608859.5; ENST00000409328.5
External Link	RMBase: m6A_site_469091
mod ID: M6ASITE044127		Click to Show/Hide the Full List
mod site	chr2:38581617-38581618:-		[5]
Sequence	CTCTCTTTGGAGGAGAGGAAACTGATTCAGAATATTCCTTA
Motif Score	2.627720238
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000608859.5; ENST00000378915.7; ENST00000358367.8; ENST00000449105.8; ENST00000410076.5; ENST00000409636.5; ENST00000409328.5; ENST00000272249.7
External Link	RMBase: m6A_site_469092
mod ID: M6ASITE044128		Click to Show/Hide the Full List
mod site	chr2:38581661-38581662:-		[5]
Sequence	GGCACGCCCGCAGTTCAAGGACTTGCATTTCTCCAAGCAGC
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; hESCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000409328.5; ENST00000410076.5; ENST00000608859.5; ENST00000272249.7; ENST00000378915.7; ENST00000409636.5; ENST00000358367.8; ENST00000449105.8
External Link	RMBase: m6A_site_469093
mod ID: M6ASITE044129		Click to Show/Hide the Full List
mod site	chr2:38581750-38581751:-		[9]
Sequence	ATGCTGGAAAATAACCTTGAACATTAGTGCCCCCTACTGGT
Motif Score	2.951386905
Cell/Tissue List	HEK293T; HeLa; HepG2; U2OS
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000409328.5; ENST00000410076.5; ENST00000358367.8; ENST00000608859.5; ENST00000378915.7; ENST00000409636.5; ENST00000272249.7; ENST00000449105.8
External Link	RMBase: m6A_site_469094
mod ID: M6ASITE044130		Click to Show/Hide the Full List
mod site	chr2:38581809-38581810:-
Sequence	GCTAGTTAATTCAAATGAAAACCTTGTTGATGAATGCTTTT
Motif Score	2.185083333
Cell/Tissue List	HEK293T
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000608859.5; ENST00000378915.7; ENST00000409636.5; ENST00000410076.5; ENST00000358367.8; ENST00000449105.8; ENST00000272249.7; ENST00000409328.5
External Link	RMBase: m6A_site_469095
mod ID: M6ASITE044131		Click to Show/Hide the Full List
mod site	chr2:38581931-38581932:-		[10]
Sequence	GACAGTTGGGACTACACTAAACCATATTTGGGAAGACGAGG
Motif Score	2.185083333
Cell/Tissue List	hNPCs
Seq Type List	m6A-seq
Transcript ID List	ENST00000410076.5; ENST00000488099.1; ENST00000378915.7; ENST00000608859.5; ENST00000449105.8; ENST00000272249.7; ENST00000409328.5; ENST00000358367.8; ENST00000409636.5
External Link	RMBase: m6A_site_469096
mod ID: M6ASITE044132		Click to Show/Hide the Full List
mod site	chr2:38581938-38581939:-		[4]
Sequence	TGACAATGACAGTTGGGACTACACTAAACCATATTTGGGAA
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000378915.7; ENST00000449105.8; ENST00000488099.1; ENST00000608859.5; ENST00000272249.7; ENST00000409328.5; ENST00000409636.5; ENST00000410076.5; ENST00000358367.8
External Link	RMBase: m6A_site_469097
mod ID: M6ASITE044133		Click to Show/Hide the Full List
mod site	chr2:38581941-38581942:-		[10]
Sequence	GAATGACAATGACAGTTGGGACTACACTAAACCATATTTGG
Motif Score	4.065041667
Cell/Tissue List	hNPCs; MT4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000378915.7; ENST00000358367.8; ENST00000608859.5; ENST00000449105.8; ENST00000272249.7; ENST00000488099.1; ENST00000409328.5; ENST00000409636.5; ENST00000410076.5
External Link	RMBase: m6A_site_469098
mod ID: M6ASITE044134		Click to Show/Hide the Full List
mod site	chr2:38581956-38581957:-		[4]
Sequence	TCTAAATGTTATTAGGAATGACAATGACAGTTGGGACTACA
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000410076.5; ENST00000488099.1; ENST00000608859.5; ENST00000409328.5; ENST00000378915.7; ENST00000272249.7; ENST00000409636.5; ENST00000358367.8; ENST00000449105.8
External Link	RMBase: m6A_site_469099
mod ID: M6ASITE044135		Click to Show/Hide the Full List
mod site	chr2:38582010-38582011:-		[11]
Sequence	GCTTTGGATATGCAGTTTGAACTTACATTATTTTCAATCTT
Motif Score	3.373380952
Cell/Tissue List	MT4
Seq Type List	MeRIP-seq
Transcript ID List	ENST00000409636.5; ENST00000449105.8; ENST00000272249.7; ENST00000378915.7; ENST00000488099.1; ENST00000410076.5; ENST00000608859.5; ENST00000358367.8; ENST00000409328.5
External Link	RMBase: m6A_site_469100
mod ID: M6ASITE044136		Click to Show/Hide the Full List
mod site	chr2:38582094-38582095:-		[4]
Sequence	ATATATATGCTGGATGTTGCACACTAAAAATTGAATATGCA
Motif Score	2.830589286
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000410076.5; ENST00000272249.7; ENST00000488099.1; ENST00000449105.8; ENST00000608859.5; ENST00000409328.5; ENST00000358367.8; ENST00000378915.7; ENST00000409636.5
External Link	RMBase: m6A_site_469101
mod ID: M6ASITE044137		Click to Show/Hide the Full List
mod site	chr2:38583854-38583855:-		[3]
Sequence	ATATTCAAGAGAAATGGGATACAAGCAATGGTTGAATATCC
Motif Score	2.110482143
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000272249.7; ENST00000425682.1; ENST00000488099.1; ENST00000410076.5; ENST00000608859.5; ENST00000409328.5; ENST00000409636.5; ENST00000449105.8; ENST00000378915.7; ENST00000358367.8
External Link	RMBase: m6A_site_469102
mod ID: M6ASITE044138		Click to Show/Hide the Full List
mod site	chr2:38585692-38585693:-		[4]
Sequence	TGATGATCCATCAGGAGGCAACAAAGTTCTTCTGCTCTCAA
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000409328.5; ENST00000608859.5; ENST00000425682.1; ENST00000358367.8; ENST00000410076.5; ENST00000378915.7; ENST00000272249.7; ENST00000409636.5; ENST00000488099.1; ENST00000449105.8
External Link	RMBase: m6A_site_469103
mod ID: M6ASITE044139		Click to Show/Hide the Full List
mod site	chr2:38585744-38585745:-		[4]
Sequence	AGGCTTTTTTCAACTATTCTACAAGCAAAAGGATCACTCGG
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000358367.8; ENST00000410076.5; ENST00000608859.5; ENST00000272249.7; ENST00000425682.1; ENST00000449105.8; ENST00000378915.7; ENST00000409328.5; ENST00000409636.5; ENST00000488099.1
External Link	RMBase: m6A_site_469104
mod ID: M6ASITE044140		Click to Show/Hide the Full List
mod site	chr2:38585830-38585831:-		[5]
Sequence	GGCTCTAGTGGAATTTGAAAACATAGATAGTGCCAAAGAAT
Motif Score	2.20572619
Cell/Tissue List	HeLa; Jurkat
Seq Type List	m6A-seq
Transcript ID List	ENST00000409328.5; ENST00000378915.7; ENST00000449105.8; ENST00000409636.5; ENST00000608859.5; ENST00000272249.7; ENST00000425682.1; ENST00000410076.5; ENST00000358367.8
External Link	RMBase: m6A_site_469105
mod ID: M6ASITE044141		Click to Show/Hide the Full List
mod site	chr2:38591536-38591537:-		[5]
Sequence	AAGCGCTGGAAAAATTTGGGACAATATGGTAAGGATGATAG
Motif Score	3.643047619
Cell/Tissue List	HeLa; Jurkat
Seq Type List	m6A-seq
Transcript ID List	ENST00000449105.8; ENST00000409328.5; ENST00000425682.1; ENST00000409636.5; ENST00000378915.7; ENST00000410076.5; ENST00000272249.7; ENST00000608859.5; ENST00000358367.8
External Link	RMBase: m6A_site_469106
mod ID: M6ASITE044142		Click to Show/Hide the Full List
mod site	chr2:38591565-38591566:-		[5]
Sequence	TGAATCTGTGGTGGAAGCAGACCTCGTGGAAGCGCTGGAAA
Motif Score	2.876744048
Cell/Tissue List	HeLa; Jurkat; NB4
Seq Type List	m6A-seq
Transcript ID List	ENST00000410076.5; ENST00000608859.5; ENST00000378915.7; ENST00000358367.8; ENST00000409636.5; ENST00000449105.8; ENST00000425682.1; ENST00000272249.7; ENST00000409328.5
External Link	RMBase: m6A_site_469107
mod ID: M6ASITE044143		Click to Show/Hide the Full List
mod site	chr2:38591591-38591592:-		[5]
Sequence	CCCGTCGTCCATGTTCGAGGACTCTGTGAATCTGTGGTGGA
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; Jurkat; GSC-11; HEK293T; NB4; MM6
Seq Type List	m6A-seq
Transcript ID List	ENST00000378915.7; ENST00000425682.1; ENST00000272249.7; ENST00000498516.1; ENST00000358367.8; ENST00000608859.5; ENST00000410076.5; ENST00000409636.5; ENST00000409328.5; ENST00000449105.8
External Link	RMBase: m6A_site_469108
mod ID: M6ASITE044144		Click to Show/Hide the Full List
mod site	chr2:38599915-38599916:-		[5]
Sequence	AGAAATACCTTTGTGGTCAGACTGTTAAAGTAAATGCAGGT
Motif Score	3.319380952
Cell/Tissue List	HeLa; Jurkat; GSC-11; HEK293T; HEC-1-A; NB4; MM6
Seq Type List	m6A-seq
Transcript ID List	ENST00000608859.5; ENST00000409328.5; ENST00000425682.1; ENST00000410076.5; ENST00000498516.1; ENST00000378915.7; ENST00000358367.8; ENST00000409636.5; ENST00000449105.8
External Link	RMBase: m6A_site_469109
mod ID: M6ASITE044145		Click to Show/Hide the Full List
mod site	chr2:38602504-38602505:-		[5]
Sequence	CTCGGCCGAGGAAGGCGAGAACCGCCGGGAAGCGACGCCCC
Motif Score	2.930744048
Cell/Tissue List	HeLa; HepG2; A549; U2OS; H1A; H1B; MT4; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; MSC; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000608859.5; ENST00000498516.1; ENST00000378915.7; ENST00000410076.5; ENST00000409636.5; ENST00000449105.8; ENST00000409328.5; ENST00000358367.8
External Link	RMBase: m6A_site_469110
mod ID: M6ASITE044146		Click to Show/Hide the Full List
mod site	chr2:38602547-38602548:-		[5]
Sequence	GCCAGGCCAAGCGTCTCAAGACCGAGGAGGGGGAGATCGAC
Motif Score	2.876744048
Cell/Tissue List	HeLa; HepG2; A549; U2OS; H1A; H1B; MT4; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; MSC; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000358367.8; ENST00000608859.5; ENST00000409328.5; ENST00000410076.5; ENST00000409636.5; ENST00000498516.1; ENST00000449105.8; ENST00000378915.7
External Link	RMBase: m6A_site_469111
mod ID: M6ASITE044147		Click to Show/Hide the Full List
mod site	chr2:38602582-38602583:-		[5]
Sequence	CAGGGAGACGTACGAGGAGGACCGGGAGTACGAGAGCCAGG
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; A549; U2OS; H1A; H1B; MT4; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; MSC; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000449105.8; ENST00000498516.1; ENST00000608859.5; ENST00000409636.5; ENST00000409328.5; ENST00000410076.5; ENST00000378915.7; ENST00000358367.8
External Link	RMBase: m6A_site_469112
mod ID: M6ASITE044148		Click to Show/Hide the Full List
mod site	chr2:38602702-38602703:-		[5]
Sequence	AGGCGCTGCCGGCGGCGAGGACTGGCCGGCGGCATCCGAGG
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; A549; U2OS; H1A; H1B; MT4; Jurkat; CD4T; GSC-11; HEK293T; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs; NB4; MM6
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000409328.5; ENST00000409636.5; ENST00000608859.5; ENST00000410076.5; ENST00000498516.1; ENST00000449105.8; ENST00000358367.8
External Link	RMBase: m6A_site_469113
mod ID: M6ASITE044149		Click to Show/Hide the Full List
mod site	chr2:38602735-38602736:-		[5]
Sequence	CGGACGGCCGGGCCGCGGAGACCCTCGCAGAAGAGGCGCTG
Motif Score	2.876744048
Cell/Tissue List	HeLa; HepG2; A549; U2OS; H1B; H1A; MT4; Jurkat; CD4T; GSC-11; HEK293T; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs; NB4; MM6
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000498516.1; ENST00000410076.5; ENST00000409328.5; ENST00000608859.5; ENST00000409636.5; ENST00000358367.8; ENST00000449105.8
External Link	RMBase: m6A_site_469114
mod ID: M6ASITE044150		Click to Show/Hide the Full List
mod site	chr2:38602951-38602952:-		[5]
Sequence	GGCTTAGGGGAGGAGGGAAGACCGGAAGCCACGGTTGCGTC
Motif Score	2.876744048
Cell/Tissue List	HeLa; U2OS; H1A; H1B; hESCs; Jurkat; CD4T; GSC-11; HEK293T; HEK293A-TOA
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000498516.1; ENST00000409636.5; ENST00000358367.8; ENST00000608859.5
External Link	RMBase: m6A_site_469115

Ref 1	RADAR: a rigorously annotated database of A-to-I RNA editing. Nucleic Acids Res. 2014 Jan;42(Database issue):D109-13. doi: 10.1093/nar/gkt996. Epub 2013 Oct 25.
Ref 2	5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m(5)C reader. Cell Res. 2017 May;27(5):606-625. doi: 10.1038/cr.2017.55. Epub 2017 Apr 18.
Ref 3	DART-seq: an antibody-free method for global m(6)A detection. Nat Methods. 2019 Dec;16(12):1275-1280. doi: 10.1038/s41592-019-0570-0. Epub 2019 Sep 23.
Ref 4	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 5	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 6	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 7	N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection. Cell Host Microbe. 2016 Nov 9;20(5):654-665. doi: 10.1016/j.chom.2016.09.015. Epub 2016 Oct 20.
Ref 8	Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons. Cell. 2012 Jun 22;149(7):1635-46. doi: 10.1016/j.cell.2012.05.003. Epub 2012 May 17.
Ref 9	Viral N(6)-methyladenosine upregulates replication and pathogenesis of human respiratory syncytial virus. Nat Commun. 2019 Oct 9;10(1):4595. doi: 10.1038/s41467-019-12504-y.
Ref 10	Perturbation of m6A writers reveals two distinct classes of mRNA methylation at internal and 5' sites. Cell Rep. 2014 Jul 10;8(1):284-96. doi: 10.1016/j.celrep.2014.05.048. Epub 2014 Jun 26.
Ref 11	Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells. Nat Microbiol. 2016 Feb 22;1:16011. doi: 10.1038/nmicrobiol.2016.11.

Epigenetic Target Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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