Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00064)

Target Name	Cathepsin S (CTSS)
Gene Name	CTSS
Sequence	MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI Click to Show/Hide
Family	Peptidase C1 family
Function	Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules and MHC class II antigen presentation (PubMed:30612035). The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L. Click to Show/Hide
Gene ID	1520
HGNC ID	HGNC:2545
Ensembl Gene ID	ENSG00000163131
KEGG ID	hsa:1520
Chromosomal Location	1q21.3

RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00064)

Cathepsin S (CTSS)

Adenosine-to-Inosine editing (A-to-I)

In total 60 m6A sequence/site(s) in this target gene
mod ID: A2ISITE010716		Click to Show/Hide the Full List
mod site	chr1:150731017-150731018:-		[1]
Sequence	AACATGGGTTCTTAGTCTTTAGCTATCTGTTAAAGCCTATG
Transcript ID List	ENST00000472977.6; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8811
mod ID: A2ISITE010717		Click to Show/Hide the Full List
mod site	chr1:150731135-150731136:-		[2]
Sequence	CCCAGCCTCCCAAAGTGCTAAGATTACAGGCGTGAGCCACT
Transcript ID List	ENST00000368985.8; ENST00000607427.1; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8812
mod ID: A2ISITE010718		Click to Show/Hide the Full List
mod site	chr1:150731136-150731137:-		[2]
Sequence	CCCCAGCCTCCCAAAGTGCTAAGATTACAGGCGTGAGCCAC
Transcript ID List	ENST00000607427.1; ENST00000472977.6; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8813
mod ID: A2ISITE010719		Click to Show/Hide the Full List
mod site	chr1:150731142-150731143:-		[2]
Sequence	CACCCACCCCAGCCTCCCAAAGTGCTAAGATTACAGGCGTG
Transcript ID List	ENST00000472977.6; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8814
mod ID: A2ISITE010720		Click to Show/Hide the Full List
mod site	chr1:150731170-150731171:-		[3]
Sequence	GGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCCCAGC
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8815
mod ID: A2ISITE010721		Click to Show/Hide the Full List
mod site	chr1:150731184-150731185:-		[2]
Sequence	ACATTAGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGAT
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8816
mod ID: A2ISITE010724		Click to Show/Hide the Full List
mod site	chr1:150731195-150731196:-		[4]
Sequence	AGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAACTCCTGA
Transcript ID List	ENST00000607427.1; ENST00000472977.6; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8817
mod ID: A2ISITE010725		Click to Show/Hide the Full List
mod site	chr1:150731199-150731200:-		[2]
Sequence	AGACAGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAACTC
Transcript ID List	ENST00000472977.6; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8818
mod ID: A2ISITE010726		Click to Show/Hide the Full List
mod site	chr1:150731202-150731203:-		[2]
Sequence	TAAAGACAGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAA
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8819
mod ID: A2ISITE010727		Click to Show/Hide the Full List
mod site	chr1:150731204-150731205:-		[2]
Sequence	AGTAAAGACAGGGTTTTGCCACATTAGCCAGGCTGGTCTCA
Transcript ID List	ENST00000472977.6; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8820
mod ID: A2ISITE010728		Click to Show/Hide the Full List
mod site	chr1:150731215-150731216:-		[2]
Sequence	TTTGTATTTTTAGTAAAGACAGGGTTTTGCCACATTAGCCA
Transcript ID List	ENST00000472977.6; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8821
mod ID: A2ISITE010729		Click to Show/Hide the Full List
mod site	chr1:150731219-150731220:-		[2]
Sequence	AATTTTTGTATTTTTAGTAAAGACAGGGTTTTGCCACATTA
Transcript ID List	ENST00000472977.6; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8822
mod ID: A2ISITE010730		Click to Show/Hide the Full List
mod site	chr1:150731220-150731221:-		[2]
Sequence	TAATTTTTGTATTTTTAGTAAAGACAGGGTTTTGCCACATT
Transcript ID List	ENST00000472977.6; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8823
mod ID: A2ISITE010731		Click to Show/Hide the Full List
mod site	chr1:150731221-150731222:-		[2]
Sequence	CTAATTTTTGTATTTTTAGTAAAGACAGGGTTTTGCCACAT
Transcript ID List	ENST00000472977.6; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8824
mod ID: A2ISITE010732		Click to Show/Hide the Full List
mod site	chr1:150731224-150731225:-		[2]
Sequence	CAGCTAATTTTTGTATTTTTAGTAAAGACAGGGTTTTGCCA
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8825
mod ID: A2ISITE010733		Click to Show/Hide the Full List
mod site	chr1:150731230-150731231:-		[2]
Sequence	CACGCCCAGCTAATTTTTGTATTTTTAGTAAAGACAGGGTT
Transcript ID List	ENST00000368985.8; ENST00000607427.1; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8826
mod ID: A2ISITE010734		Click to Show/Hide the Full List
mod site	chr1:150731238-150731239:-		[3]
Sequence	TGCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAAG
Transcript ID List	ENST00000472977.6; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8827
mod ID: A2ISITE010735		Click to Show/Hide the Full List
mod site	chr1:150731239-150731240:-		[2]
Sequence	GTGCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAAA
Transcript ID List	ENST00000472977.6; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8828
mod ID: A2ISITE010736		Click to Show/Hide the Full List
mod site	chr1:150731243-150731244:-		[2]
Sequence	AGGCGTGCACCACCACGCCCAGCTAATTTTTGTATTTTTAG
Transcript ID List	ENST00000472977.6; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8829
mod ID: A2ISITE010737		Click to Show/Hide the Full List
mod site	chr1:150731265-150731266:-		[3]
Sequence	CCTCCCGAGTAGCTGGAATTATAGGCGTGCACCACCACGCC
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8830
mod ID: A2ISITE010738		Click to Show/Hide the Full List
mod site	chr1:150731275-150731276:-		[2]
Sequence	CCTGCCTCAGCCTCCCGAGTAGCTGGAATTATAGGCGTGCA
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8831
mod ID: A2ISITE010739		Click to Show/Hide the Full List
mod site	chr1:150731287-150731288:-		[4]
Sequence	TCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGAAT
Transcript ID List	ENST00000472977.6; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8832
mod ID: A2ISITE010740		Click to Show/Hide the Full List
mod site	chr1:150731304-150731305:-		[2]
Sequence	ACTTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCC
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8833
mod ID: A2ISITE010741		Click to Show/Hide the Full List
mod site	chr1:150731310-150731311:-		[2]
Sequence	ACTGCAACTTCTGCCTCCCGAGTTCAAGCGATTCTCCTGCC
Transcript ID List	ENST00000607427.1; ENST00000368985.8; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8834
mod ID: A2ISITE010742		Click to Show/Hide the Full List
mod site	chr1:150731335-150731336:-		[3]
Sequence	GAGTGCAGTGGCACCATCTCAGTTCACTGCAACTTCTGCCT
Transcript ID List	ENST00000368985.8; ENST00000607427.1; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8835
mod ID: A2ISITE010743		Click to Show/Hide the Full List
mod site	chr1:150731373-150731374:-		[2]
Sequence	GTTTTTTGAGACGGAGTCTCACTCTGTTGCCCAGGCTGGAG
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8836
mod ID: A2ISITE010744		Click to Show/Hide the Full List
mod site	chr1:150731935-150731936:-		[2]
Sequence	CCAGCCTGGGTGACAGAGCAAGACCCTGTCTTAAAAAAAGA
Transcript ID List	ENST00000607427.1; ENST00000472977.6; rmsk_263120; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8837
mod ID: A2ISITE010745		Click to Show/Hide the Full List
mod site	chr1:150731936-150731937:-		[2]
Sequence	TCCAGCCTGGGTGACAGAGCAAGACCCTGTCTTAAAAAAAG
Transcript ID List	ENST00000472977.6; rmsk_263120; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8838
mod ID: A2ISITE010746		Click to Show/Hide the Full List
mod site	chr1:150731941-150731942:-		[2]
Sequence	TGCACTCCAGCCTGGGTGACAGAGCAAGACCCTGTCTTAAA
Transcript ID List	ENST00000472977.6; rmsk_263120; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8839
mod ID: A2ISITE010747		Click to Show/Hide the Full List
mod site	chr1:150731999-150732000:-		[2]
Sequence	CAGGAGGATCACAAGAGCCCAGGAGGTTGAGAATGCAGTGA
Transcript ID List	ENST00000368985.8; ENST00000607427.1; rmsk_263120; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8840
mod ID: A2ISITE010748		Click to Show/Hide the Full List
mod site	chr1:150732004-150732005:-		[2]
Sequence	TAAGACAGGAGGATCACAAGAGCCCAGGAGGTTGAGAATGC
Transcript ID List	ENST00000472977.6; rmsk_263120; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8841
mod ID: A2ISITE010749		Click to Show/Hide the Full List
mod site	chr1:150732006-150732007:-		[2]
Sequence	TCTAAGACAGGAGGATCACAAGAGCCCAGGAGGTTGAGAAT
Transcript ID List	rmsk_263120; ENST00000607427.1; ENST00000472977.6; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8842
mod ID: A2ISITE010750		Click to Show/Hide the Full List
mod site	chr1:150732009-150732010:-		[2]
Sequence	ATGTCTAAGACAGGAGGATCACAAGAGCCCAGGAGGTTGAG
Transcript ID List	ENST00000607427.1; ENST00000472977.6; ENST00000368985.8; rmsk_263120
External Link	RMBase: RNA-editing_site_8843
mod ID: A2ISITE010751		Click to Show/Hide the Full List
mod site	chr1:150732022-150732023:-		[2]
Sequence	CCCTGCTATGCAGATGTCTAAGACAGGAGGATCACAAGAGC
Transcript ID List	ENST00000472977.6; rmsk_263120; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8844
mod ID: A2ISITE010752		Click to Show/Hide the Full List
mod site	chr1:150732023-150732024:-		[3]
Sequence	TCCCTGCTATGCAGATGTCTAAGACAGGAGGATCACAAGAG
Transcript ID List	ENST00000472977.6; ENST00000368985.8; ENST00000607427.1; rmsk_263120
External Link	RMBase: RNA-editing_site_8845
mod ID: A2ISITE010755		Click to Show/Hide the Full List
mod site	chr1:150732067-150732068:-		[3]
Sequence	AAATAAAAAAGAAACTATCCAGGAGTGGTGGTGTGTGCCTG
Transcript ID List	ENST00000368985.8; ENST00000607427.1; rmsk_263120; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8846
mod ID: A2ISITE010756		Click to Show/Hide the Full List
mod site	chr1:150732071-150732072:-		[3]
Sequence	ACAAAAATAAAAAAGAAACTATCCAGGAGTGGTGGTGTGTG
Transcript ID List	ENST00000607427.1; rmsk_263120; ENST00000472977.6; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8847
mod ID: A2ISITE010762		Click to Show/Hide the Full List
mod site	chr1:150732091-150732092:-		[4]
Sequence	CATAGTGAGACCTTGTCTCCACAAAAATAAAAAAGAAACTA
Transcript ID List	ENST00000368985.8; ENST00000472977.6; rmsk_263120; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8848
mod ID: A2ISITE010763		Click to Show/Hide the Full List
mod site	chr1:150732108-150732109:-		[2]
Sequence	AAGACCAGCCTGGACAACATAGTGAGACCTTGTCTCCACAA
Transcript ID List	ENST00000368985.8; ENST00000607427.1; ENST00000472977.6; rmsk_263120
External Link	RMBase: RNA-editing_site_8849
mod ID: A2ISITE010764		Click to Show/Hide the Full List
mod site	chr1:150732110-150732111:-		[2]
Sequence	TCAAGACCAGCCTGGACAACATAGTGAGACCTTGTCTCCAC
Transcript ID List	ENST00000472977.6; ENST00000607427.1; ENST00000368985.8; rmsk_263120
External Link	RMBase: RNA-editing_site_8850
mod ID: A2ISITE010765		Click to Show/Hide the Full List
mod site	chr1:150732128-150732129:-		[2]
Sequence	CGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGGACAACATA
Transcript ID List	rmsk_263120; ENST00000607427.1; ENST00000368985.8; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8851
mod ID: A2ISITE010766		Click to Show/Hide the Full List
mod site	chr1:150732136-150732137:-		[3]
Sequence	AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGG
Transcript ID List	ENST00000607427.1; ENST00000472977.6; rmsk_263120; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8852
mod ID: A2ISITE010767		Click to Show/Hide the Full List
mod site	chr1:150732156-150732157:-		[2]
Sequence	ACACTTTGGGAGGCTGAAGTAGGAGGATCGTCTTGAGCCCA
Transcript ID List	ENST00000607427.1; rmsk_263120; ENST00000368985.8; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8853
mod ID: A2ISITE010770		Click to Show/Hide the Full List
mod site	chr1:150732159-150732160:-		[2]
Sequence	CCAACACTTTGGGAGGCTGAAGTAGGAGGATCGTCTTGAGC
Transcript ID List	rmsk_263120; ENST00000472977.6; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8854
mod ID: A2ISITE010781		Click to Show/Hide the Full List
mod site	chr1:150732160-150732161:-		[2]
Sequence	CCCAACACTTTGGGAGGCTGAAGTAGGAGGATCGTCTTGAG
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000607427.1; rmsk_263120
External Link	RMBase: RNA-editing_site_8855
mod ID: A2ISITE010791		Click to Show/Hide the Full List
mod site	chr1:150732176-150732177:-		[2]
Sequence	GGCTCATGCCTGTAATCCCAACACTTTGGGAGGCTGAAGTA
Transcript ID List	ENST00000368985.8; rmsk_263120; ENST00000607427.1; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8856
mod ID: A2ISITE010793		Click to Show/Hide the Full List
mod site	chr1:150732177-150732178:-		[2]
Sequence	TGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCTGAAGT
Transcript ID List	ENST00000607427.1; ENST00000368985.8; rmsk_263120; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8857
mod ID: A2ISITE010794		Click to Show/Hide the Full List
mod site	chr1:150732182-150732183:-		[2]
Sequence	TGTAGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGCT
Transcript ID List	ENST00000472977.6; rmsk_263120; ENST00000368985.8; ENST00000607427.1
External Link	RMBase: RNA-editing_site_8858
mod ID: A2ISITE010795		Click to Show/Hide the Full List
mod site	chr1:150732183-150732184:-		[2]
Sequence	GTGTAGTGGCTCATGCCTGTAATCCCAACACTTTGGGAGGC
Transcript ID List	ENST00000368985.8; ENST00000607427.1; rmsk_263120; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8859
mod ID: A2ISITE010801		Click to Show/Hide the Full List
mod site	chr1:150732735-150732736:-		[4]
Sequence	GCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCACGA
Transcript ID List	rmsk_596; ENST00000368985.8; ENST00000472977.6; ENST00000607427.1; ENST00000448301.6
External Link	RMBase: RNA-editing_site_8860
mod ID: A2ISITE010802		Click to Show/Hide the Full List
mod site	chr1:150732744-150732745:-		[4]
Sequence	CACGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCT
Transcript ID List	ENST00000448301.6; rmsk_596; ENST00000472977.6; ENST00000607427.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8861
mod ID: A2ISITE010803		Click to Show/Hide the Full List
mod site	chr1:150732771-150732772:-		[4]
Sequence	TACTAAAAATACAAAAAATTAGCCGAGCACGGTGGTGCATG
Transcript ID List	ENST00000472977.6; rmsk_596; ENST00000607427.1; ENST00000448301.6; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8862
mod ID: A2ISITE010804		Click to Show/Hide the Full List
mod site	chr1:150732796-150732797:-		[4]
Sequence	GGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAA
Transcript ID List	ENST00000607427.1; rmsk_596; ENST00000472977.6; ENST00000368985.8; ENST00000448301.6
External Link	RMBase: RNA-editing_site_8863
mod ID: A2ISITE010805		Click to Show/Hide the Full List
mod site	chr1:150732809-150732810:-		[4]
Sequence	TAAAGAGCAGCCTGGCTAACATGGTGAAACCCCATCTCTAC
Transcript ID List	rmsk_596; ENST00000472977.6; ENST00000368985.8; ENST00000607427.1; ENST00000448301.6
External Link	RMBase: RNA-editing_site_8864
mod ID: A2ISITE010808		Click to Show/Hide the Full List
mod site	chr1:150740722-150740723:-		[1]
Sequence	ACTCTAGCTTCAGTGACAGAATGAGACCCTATCTCGAAAAA
Transcript ID List	ENST00000368985.8; ENST00000472977.6; ENST00000448301.6; rmsk_263150; ENST00000483930.1
External Link	RMBase: RNA-editing_site_8865
mod ID: A2ISITE010809		Click to Show/Hide the Full List
mod site	chr1:150741098-150741099:-		[3]
Sequence	TGAGGTAGGAGGATTTTTTGAGCTGAGGAGTTTGAGGCTAC
Transcript ID List	rmsk_263151; ENST00000472977.6; ENST00000448301.6; ENST00000483930.1; ENST00000368985.8
External Link	RMBase: RNA-editing_site_8866
mod ID: A2ISITE010810		Click to Show/Hide the Full List
mod site	chr1:150749433-150749434:-		[1]
Sequence	TTAGGGTCTTGTTCTGGATTAGGTTTTGGCGTAAAGGCATG
Transcript ID List	ENST00000480760.1; ENST00000368985.8; ENST00000483930.1; ENST00000448301.6; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8867
mod ID: A2ISITE010811		Click to Show/Hide the Full List
mod site	chr1:150749777-150749778:-		[4]
Sequence	ACTCACTTGTAGTCTCAGCTACTTGGGAGGGTGAGGCAGGA
Transcript ID List	ENST00000472977.6; rmsk_263177; ENST00000448301.6; ENST00000368985.8; ENST00000480760.1; ENST00000483930.1
External Link	RMBase: RNA-editing_site_8868
mod ID: A2ISITE010812		Click to Show/Hide the Full List
mod site	chr1:150749861-150749862:-		[4]
Sequence	GGGAGTTTGACACCAGCCTGAGCAACATCGCGAGACCCTTA
Transcript ID List	rmsk_263177; ENST00000483930.1; ENST00000480760.1; ENST00000368985.8; ENST00000448301.6; ENST00000472977.6
External Link	RMBase: RNA-editing_site_8869
mod ID: A2ISITE010813		Click to Show/Hide the Full List
mod site	chr1:150753018-150753019:-		[3]
Sequence	CTACAAAAAATAAAAATAAAAATTAGCCAGGCATGGTGCGC
Transcript ID List	ENST00000480760.1; ENST00000368985.8; rmsk_263182; ENST00000448301.6
External Link	RMBase: RNA-editing_site_8870

N6-methyladenosine (m6A)

In total 4 m6A sequence/site(s) in this target gene
mod ID: M6ASITE051323		Click to Show/Hide the Full List
mod site	chr1:150730482-150730483:-		[5]
Sequence	CCCCTGAAGTAGATCATAAGACTGTCATGTAAGAGGTGCTC
Motif Score	3.319380952
Cell/Tissue List	CD8T
Seq Type List	m6A-CLIP/IP
Transcript ID List	ENST00000368985.8; rmsk_263116
External Link	RMBase: m6A_site_52164
mod ID: M6ASITE051324		Click to Show/Hide the Full List
mod site	chr1:150751941-150751942:-		[6]
Sequence	AAGCACAGCTGAAGCTGAAAACAGGAAAGCTGGTGTCTCTC
Motif Score	2.20572619
Cell/Tissue List	liver
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000368985.8; ENST00000448301.6; ENST00000480760.1
External Link	RMBase: m6A_site_52165
mod ID: M6ASITE051325		Click to Show/Hide the Full List
mod site	chr1:150764652-150764653:-		[7]
Sequence	TGGAAGAAAACCTATGGCAAACAATACAAGGAAAAGGTAGA
Motif Score	2.20572619
Cell/Tissue List	HEC-1-A
Seq Type List	m6A-seq
Transcript ID List	ENST00000368985.8; ENST00000480760.1; ENST00000448301.6
External Link	RMBase: m6A_site_52166
mod ID: M6ASITE051326		Click to Show/Hide the Full List
mod site	chr1:150764663-150764664:-		[7]
Sequence	ACTGGCATCTCTGGAAGAAAACCTATGGCAAACAATACAAG
Motif Score	2.185083333
Cell/Tissue List	HEC-1-A
Seq Type List	m6A-seq
Transcript ID List	ENST00000448301.6; ENST00000368985.8; ENST00000480760.1
External Link	RMBase: m6A_site_52167

Ref 1	RADAR: a rigorously annotated database of A-to-I RNA editing. Nucleic Acids Res. 2014 Jan;42(Database issue):D109-13. doi: 10.1093/nar/gkt996. Epub 2013 Oct 25.
Ref 2	Widespread RNA editing of embedded alu elements in the human transcriptome. Genome Res. 2004 Sep;14(9):1719-25. doi: 10.1101/gr.2855504.
Ref 3	Accurate identification of A-to-I RNA editing in human by transcriptome sequencing. Genome Res. 2012 Jan;22(1):142-50. doi: 10.1101/gr.124107.111. Epub 2011 Sep 29.
Ref 4	Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome. Nat Biotechnol. 2012 Feb 12;30(3):253-60. doi: 10.1038/nbt.2122.
Ref 5	A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation. Genes Dev. 2015 Oct 1;29(19):2037-53. doi: 10.1101/gad.269415.115. Epub 2015 Sep 24.
Ref 6	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 7	m(6)A mRNA methylation regulates AKT activity to promote the proliferation and tumorigenicity of endometrial cancer. Nat Cell Biol. 2018 Sep;20(9):1074-1083. doi: 10.1038/s41556-018-0174-4. Epub 2018 Aug 27.

Epigenetic Target Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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