Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00053)
Target Name Oligophrenin 1 (OPHN1)
Synonyms
OPN1; ARHGAP41; MRX60; mental retardation, X-linked 60
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Gene Name OPHN1
Sequence
MGHPPLEFSDCYLDSPDFRERLKCYEQELERTNKFIKDVIKDGNALISAMRNYSSAVQKFSQTLQSFQFDFIGDTLTDDEINIAESFKEFAELLNEVENERMMMVHNASDLLIKPLENFRKEQIGFTKERKKKFEKDGERFYSLLDRHLHLSSKKKESQLQEADLQVDKERHNFFESSLDYVYQIQEVQESKKFNIVEPVLAFLHSLFISNSLTVELTQDFLPYKQQLQLSLQNTRNHFSSTREEMEELKKRMKEAPQTCKLPGQPTIEGYLYTQEKWALGISWVKYYCQYEKETKTLTMTPMEQKPGAKQGPLDLTLKYCVRRKTESIDKRFCFDIETNERPGTITLQALSEANRRLWMEAMDGKEPIYHSPITKQQEMELNEVGFKFVRKCINIIETKGIKTEGLYRTVGSNIQVQKLLNAFFDPKCPGDVDFHNSDWDIKTITSSLKFYLRNLSEPVMTYRLHKELVSAAKSDNLDYRLGAIHSLVYKLPEKNREMLELLIRHLVNVCEHSKENLMTPSNMGVIFGPTLMRAQEDTVAAMMNIKFQNIVVEILIEHFGKIYLGPPEESAAPPVPPPRVTARRHKPITISKRLLRERTVFYTSSLDESEDEIQHQTPNGTITSSIEPPKPPQHPKLPIQRSGETDPGRKSPSRPILDGKLEPCPEVDVGKLVSRLQDGGTKITPKATNGPMPGSGPTKTPSFHIKRPAPRPLAHHKEGDADSFSKVRPPGEKPTIIRPPVRPPDPPCRAATPQKPEPKPDIVAGNAGEITSSVVASRTRFFETASRKTGSSQGRLPGDES
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Function
Stimulates GTP hydrolysis of members of the Rho family. Its action on RHOA activity and signaling is implicated in growth and stabilization of dendritic spines, and therefore in synaptic function. Critical for the stabilization of AMPA receptors at postsynaptic sites. Critical for the regulation of synaptic vesicle endocytosis at presynaptic terminals. Required for the localization of NR1D1 to dendrites, can suppress its repressor activity and protect it from proteasomal degradation (By similarity).
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Gene ID 4983
HGNC ID HGNC:8148
Ensembl Gene ID ENSG00000079482
KEGG ID hsa:4983
Chromosomal Location Xq12
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00053)
Oligophrenin 1 (OPHN1)
Adenosine-to-Inosine editing (A-to-I)
In total 11 m6A sequence/site(s) in this target gene
mod ID: A2ISITE003525 Click to Show/Hide the Full List
mod site chrX:68174603-68174604:- [1]
Sequence TGGCTTGGGCTTATAGTCCCAACTGCCTGGGAGGCTGAGGT
Transcript ID List rmsk_3024996; ENST00000355520.6
External Link RMBase: RNA-editing_site_141158
mod ID: A2ISITE003526 Click to Show/Hide the Full List
mod site chrX:68209470-68209471:- [2]
Sequence TGGGCTCAAGCAGCCCTCCTACCTCAGCCTCCTGAGTGGCT
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: RNA-editing_site_141159
mod ID: A2ISITE003527 Click to Show/Hide the Full List
mod site chrX:68209564-68209565:- [2]
Sequence CTCTTTTCTTTTCTTTTTTTAAGACAGGATCTTGCTCTGTT
Transcript ID List ENST00000355520.6; ENST00000467444.1
External Link RMBase: RNA-editing_site_141160
mod ID: A2ISITE003528 Click to Show/Hide the Full List
mod site chrX:68333391-68333392:- [1]
Sequence CTGCCTGCTCGGCCTCTCAAAGTGCTGGGATTACAGGCGTG
Transcript ID List ENST00000486068.1; ENST00000355520.6
External Link RMBase: RNA-editing_site_141161
mod ID: A2ISITE003529 Click to Show/Hide the Full List
mod site chrX:68352901-68352902:- [1]
Sequence CCTCAGCCTCCCATAGTGTTAGGATTACAGGCGTAAGCCAC
Transcript ID List ENST00000355520.6
External Link RMBase: RNA-editing_site_141162
mod ID: A2ISITE003530 Click to Show/Hide the Full List
mod site chrX:68375229-68375230:- [1]
Sequence AAAGTGCTGGGGTTCCAGGTATGAGCCACCATGTCTGGCAC
Transcript ID List ENST00000355520.6
External Link RMBase: RNA-editing_site_141163
mod ID: A2ISITE003531 Click to Show/Hide the Full List
mod site chrX:68391133-68391134:- [1]
Sequence GGAAATTTGCAGATGTGATTAAGGATCATGAGATGAACAGA
Transcript ID List ENST00000355520.6; rmsk_3025522
External Link RMBase: RNA-editing_site_141164
mod ID: A2ISITE003532 Click to Show/Hide the Full List
mod site chrX:68391973-68391974:- [1]
Sequence GCTTAAAGCATGCACATATTATCTGATAGTTCTGGAGGTCA
Transcript ID List ENST00000355520.6
External Link RMBase: RNA-editing_site_141165
mod ID: A2ISITE003533 Click to Show/Hide the Full List
mod site chrX:68405285-68405286:- [1]
Sequence ACTTGAGCCCAGGTGTTTGAAGCTATAGTGAGCTATAATCA
Transcript ID List ENST00000355520.6; rmsk_3025564
External Link RMBase: RNA-editing_site_141166
mod ID: A2ISITE003534 Click to Show/Hide the Full List
mod site chrX:68426195-68426196:- [1]
Sequence CACCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTG
Transcript ID List ENST00000355520.6
External Link RMBase: RNA-editing_site_141167
mod ID: A2ISITE003535 Click to Show/Hide the Full List
mod site chrX:68427699-68427700:- [1]
Sequence CTAGGAAAATAGAGGATGACAGTCTTCAGATAGGGGCTTTC
Transcript ID List ENST00000355520.6
External Link RMBase: RNA-editing_site_141168
2'-O-Methylation (2'-O-Me)
In total 3 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000531 Click to Show/Hide the Full List
mod site chrX:68102083-68102084:- [3]
Sequence GGAACGATACAGAGAAGATTAGCATGGCCCCTGCCCAGTGC
Cell/Tissue List N.A.; HEK293
Seq Type List RiboMeth-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1; rmsk_3024864; ENST00000516336.1
External Link RMBase: Nm_site_6835
mod ID: 2OMSITE000532 Click to Show/Hide the Full List
mod site chrX:68102089-68102090:- [3]
Sequence AAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCC
Cell/Tissue List N.A.; HEK293
Seq Type List RiboMeth-seq
Transcript ID List ENST00000516336.1; rmsk_3024864; ENST00000484842.1; ENST00000355520.6
External Link RMBase: Nm_site_6836
mod ID: 2OMSITE000530 Click to Show/Hide the Full List
mod site chrX:68102082-68102083:- [3]
Sequence GAACGATACAGAGAAGATTAGCATGGCCCCTGCCCAGTGCC
Seq Type List RiboMeth-seq
Transcript ID List ENST00000516336.1; ENST00000484842.1; rmsk_3024864; ENST00000355520.6
External Link RMBase: Nm_site_6834
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004586 Click to Show/Hide the Full List
mod site chrX:68046805-68046806:-
Sequence TTCCTGCTTCCTCAGAGGGCCATTGAACTCTGAGAGATTTG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m5C_site_45125
N6-methyladenosine (m6A)
In total 70 m6A sequence/site(s) in this target gene
mod ID: M6ASITE092015 Click to Show/Hide the Full List
mod site chrX:68044793-68044794:- [4]
Sequence CCTATCTTGGAGAGCTGGGGACCAGCAGTCTGCCTGGAGGC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862455
mod ID: M6ASITE092016 Click to Show/Hide the Full List
mod site chrX:68044827-68044828:- [4]
Sequence ATTGCTGTGTGTTGCCTGGGACACAGATCAAGGGCCTATCT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862456
mod ID: M6ASITE092017 Click to Show/Hide the Full List
mod site chrX:68046490-68046491:- [4]
Sequence GTTACATGCAGCCACTTAGGACAAATCTGCAAAGCATGTTT
Motif Score 3.643047619
Cell/Tissue List HeLa; U2OS; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862457
mod ID: M6ASITE092018 Click to Show/Hide the Full List
mod site chrX:68046534-68046535:- [4]
Sequence CCCACAGCACCTCCATGTGGACTTAGGAAGGTGGCCTTCCT
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; U2OS; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862458
mod ID: M6ASITE092019 Click to Show/Hide the Full List
mod site chrX:68046644-68046645:- [4]
Sequence GTCTCCTACTGAGGATATGGACACTGGTGCCATGTCAGCGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1A; H1B; fibroblasts; GSC-11; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862459
mod ID: M6ASITE092020 Click to Show/Hide the Full List
mod site chrX:68046684-68046685:- [4]
Sequence GGAATAGAAATGTTTGCTGAACATTGGAGAATCTCAACATG
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GSC-11; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862460
mod ID: M6ASITE092021 Click to Show/Hide the Full List
mod site chrX:68046750-68046751:- [4]
Sequence TCTCAGGGGTCTTACCTTGAACTGAAGGCCACTTGAGTTGG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; H1A; hESCs; fibroblasts; H1299; GSC-11; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862461
mod ID: M6ASITE092022 Click to Show/Hide the Full List
mod site chrX:68046775-68046776:- [4]
Sequence TGAGAGATTTGGGGCTAAAGACTGATCTCAGGGGTCTTACC
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; H1A; hESCs; fibroblasts; H1299; GSC-11; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862462
mod ID: M6ASITE092023 Click to Show/Hide the Full List
mod site chrX:68046799-68046800:- [4]
Sequence CTTCCTCAGAGGGCCATTGAACTCTGAGAGATTTGGGGCTA
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; H1A; hESCs; fibroblasts; H1299; GSC-11; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862463
mod ID: M6ASITE092024 Click to Show/Hide the Full List
mod site chrX:68046827-68046828:- [4]
Sequence AGTTTTCAACTCTTCCCTGAACTTCCTGCTTCCTCAGAGGG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; H1A; hESCs; fibroblasts; GSC-11; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862464
mod ID: M6ASITE092025 Click to Show/Hide the Full List
mod site chrX:68046886-68046887:- [4]
Sequence TCAAGCCAGACTCTGCCAAAACCAAGATATCCACTTACCTG
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; H1B; hNPCs; hESCs; fibroblasts; GSC-11; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862465
mod ID: M6ASITE092026 Click to Show/Hide the Full List
mod site chrX:68046897-68046898:- [4]
Sequence GCTGGACTCCCTCAAGCCAGACTCTGCCAAAACCAAGATAT
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; HepG2; hNPCs; fibroblasts; A549; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862466
mod ID: M6ASITE092027 Click to Show/Hide the Full List
mod site chrX:68046912-68046913:- [4]
Sequence ATAACACTGTGAAGAGCTGGACTCCCTCAAGCCAGACTCTG
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; HepG2; hNPCs; fibroblasts; A549; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862467
mod ID: M6ASITE092028 Click to Show/Hide the Full List
mod site chrX:68046996-68046997:- [4]
Sequence ATAAGGAGCATATGTCCTAGACAGGTGTTTATATCTCCTTT
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; HEK293A-TOA; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862468
mod ID: M6ASITE092029 Click to Show/Hide the Full List
mod site chrX:68047038-68047039:- [5]
Sequence TCCTAGCCTTGCACTTTCAGACTCTCTCTGGGAGGCCATAA
Motif Score 3.319380952
Cell/Tissue List HEK293T; HEK293A-TOA; iSLK
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862469
mod ID: M6ASITE092030 Click to Show/Hide the Full List
mod site chrX:68047100-68047101:-
Sequence AAAGAGTCTTTCTTCTTCAAACCTTTGTGTGCGGAGTCATT
Motif Score 2.185083333
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862470
mod ID: M6ASITE092031 Click to Show/Hide the Full List
mod site chrX:68048444-68048445:- [4]
Sequence ATCCACAGTTCTCAAGGCAGACTTCCTGGAGATGAAAGTTG
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862471
mod ID: M6ASITE092032 Click to Show/Hide the Full List
mod site chrX:68052546-68052547:- [4]
Sequence TTGAAACAGCTTCCCGGAAAACAGGAAGGTAAGATATGGAG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862472
mod ID: M6ASITE092033 Click to Show/Hide the Full List
mod site chrX:68052561-68052562:- [4]
Sequence CCAGGACCAGGTTTTTTGAAACAGCTTCCCGGAAAACAGGA
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862473
mod ID: M6ASITE092034 Click to Show/Hide the Full List
mod site chrX:68052576-68052577:- [4]
Sequence TTTGCAGGGTGGCTTCCAGGACCAGGTTTTTTGAAACAGCT
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862474
mod ID: M6ASITE092035 Click to Show/Hide the Full List
mod site chrX:68053694-68053695:- [4]
Sequence GCTACTCCCCAAAAGCCAGAACCAAAGCCAGATATTGTGGC
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862475
mod ID: M6ASITE092036 Click to Show/Hide the Full List
mod site chrX:68063887-68063888:- [4]
Sequence CCCTCTTTCCACATAAAGAGACCAGCTCCCCGGCCCCTGGC
Motif Score 2.876744048
Cell/Tissue List HeLa; GSC-11; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862476
mod ID: M6ASITE092037 Click to Show/Hide the Full List
mod site chrX:68063910-68063911:- [4]
Sequence CAGGCTCTGGGCCCACCAAGACCCCCTCTTTCCACATAAAG
Motif Score 2.876744048
Cell/Tissue List HeLa; GSC-11; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862477
mod ID: M6ASITE092038 Click to Show/Hide the Full List
mod site chrX:68063938-68063939:- [4]
Sequence ACCCCAAAGGCCACCAATGGACCCATGCCAGGCTCTGGGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; GSC-11; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862478
mod ID: M6ASITE092039 Click to Show/Hide the Full List
mod site chrX:68063967-68063968:- [4]
Sequence CTAGGCTGCAGGATGGAGGGACCAAGATCACCCCAAAGGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; GSC-11; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862479
mod ID: M6ASITE092040 Click to Show/Hide the Full List
mod site chrX:68064075-68064076:- [4]
Sequence CTATTCAGAGGAGTGGGGAAACTGATCCTGGGAGGAAGTCC
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862480
mod ID: M6ASITE092041 Click to Show/Hide the Full List
mod site chrX:68064100-68064101:- [4]
Sequence AAGCCACCACAACACCCCAAACTACCTATTCAGAGGAGTGG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862481
mod ID: M6ASITE092042 Click to Show/Hide the Full List
mod site chrX:68064127-68064128:- [4]
Sequence ACTATCACCAGCAGCATAGAACCCCCCAAGCCACCACAACA
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862482
mod ID: M6ASITE092043 Click to Show/Hide the Full List
mod site chrX:68064159-68064160:- [4]
Sequence TAGATGAAATCCAACATCAAACACCGAATGGTACTATCACC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862483
mod ID: M6ASITE092044 Click to Show/Hide the Full List
mod site chrX:68070830-68070831:- [6]
Sequence TGCTGGCTGAATGGGCTTGGACTGTGGTCCTGAAAGCAGCA
Motif Score 4.065041667
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000426382.2; ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862484
mod ID: M6ASITE092045 Click to Show/Hide the Full List
mod site chrX:68070971-68070972:- [4]
Sequence GGGAGCCAAGATTGTCAAAGACCTAATGTCCCAAGCTGAGA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1; ENST00000426382.2
External Link RMBase: m6A_site_862485
mod ID: M6ASITE092046 Click to Show/Hide the Full List
mod site chrX:68071017-68071018:- [4]
Sequence AGGTGCTCAACAACATGGAGACTGGCACTTCTCTGTTTGAT
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000426382.2; ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862486
mod ID: M6ASITE092047 Click to Show/Hide the Full List
mod site chrX:68071118-68071119:- [4]
Sequence GGGTGGAGCTAAATTTGCAGACAAGATCCACCTGATCAATA
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000484842.1; ENST00000426382.2; ENST00000355520.6
External Link RMBase: m6A_site_862487
mod ID: M6ASITE092048 Click to Show/Hide the Full List
mod site chrX:68071190-68071191:- [4]
Sequence TTTGATGAAGAAGGAGCTGAACTACTTTGTGAAGGTCTTGG
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1; ENST00000426382.2
External Link RMBase: m6A_site_862488
mod ID: M6ASITE092049 Click to Show/Hide the Full List
mod site chrX:68071660-68071661:- [7]
Sequence GTAGAATAACCAGATAACAAACAACCAGAGGATTAAGGCTA
Motif Score 2.20572619
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000426382.2; ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862489
mod ID: M6ASITE092050 Click to Show/Hide the Full List
mod site chrX:68071664-68071665:- [6]
Sequence CTGTGTAGAATAACCAGATAACAAACAACCAGAGGATTAAG
Motif Score 2.168095238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000355520.6; ENST00000426382.2; ENST00000484842.1
External Link RMBase: m6A_site_862490
mod ID: M6ASITE092051 Click to Show/Hide the Full List
mod site chrX:68073224-68073225:- [4]
Sequence GTGACAGCAAGAAGGCACAAACCAATCACGATTTCAAAGCG
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862491
mod ID: M6ASITE092052 Click to Show/Hide the Full List
mod site chrX:68096906-68096907:- [4]
Sequence GATGAACATCAAATTCCAGAACATAGTGGTGGAAATACTAA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862492
mod ID: M6ASITE092053 Click to Show/Hide the Full List
mod site chrX:68096921-68096922:- [4]
Sequence CACTGTGGCCGCCATGATGAACATCAAATTCCAGAACATAG
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862493
mod ID: M6ASITE092054 Click to Show/Hide the Full List
mod site chrX:68096942-68096943:- [4]
Sequence CCTGATGAGAGCTCAGGAGGACACTGTGGCCGCCATGATGA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862494
mod ID: M6ASITE092055 Click to Show/Hide the Full List
mod site chrX:68111864-68111865:- [4]
Sequence ATGCTGGAACTTCTGATAAGACACTTGGTCAAGTAAGTAAC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862495
mod ID: M6ASITE092056 Click to Show/Hide the Full List
mod site chrX:68111876-68111877:- [4]
Sequence AAGAACCGAGAGATGCTGGAACTTCTGATAAGACACTTGGT
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000484842.1
External Link RMBase: m6A_site_862496
mod ID: M6ASITE092057 Click to Show/Hide the Full List
mod site chrX:68111892-68111893:- [4]
Sequence ATATAAGCTACCAGAAAAGAACCGAGAGATGCTGGAACTTC
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000484842.1; ENST00000355520.6
External Link RMBase: m6A_site_862497
mod ID: M6ASITE092058 Click to Show/Hide the Full List
mod site chrX:68192789-68192790:- [4]
Sequence AAAGTATTTTCTAAAGTAAAACATACACATACTTGCCCACC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862499
mod ID: M6ASITE092060 Click to Show/Hide the Full List
mod site chrX:68192840-68192841:- [4]
Sequence GTGACTGGAAGAGAAAGGAGACACTGCTAAAATGTGGTAGA
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862500
mod ID: M6ASITE092061 Click to Show/Hide the Full List
mod site chrX:68194474-68194475:- [4]
Sequence TACCACAGCCCTATAACAAAACAGCAAGAAAGTGAGTCACT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862501
mod ID: M6ASITE092062 Click to Show/Hide the Full List
mod site chrX:68197188-68197189:- [4]
Sequence GAAGCCATGGATGGGAAAGAACCTGTAAGTTACCTGACACT
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862502
mod ID: M6ASITE092063 Click to Show/Hide the Full List
mod site chrX:68197256-68197257:- [4]
Sequence TTTTCCCCCTCAGGCCAGGAACCATCACTCTGCAGGCCCTT
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862503
mod ID: M6ASITE092064 Click to Show/Hide the Full List
mod site chrX:68201628-68201629:- [4]
Sequence GGTTCTGTTTTGACATAGAAACTAATGAAAGGTAAGCTGTG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000467444.1
External Link RMBase: m6A_site_862504
mod ID: M6ASITE092065 Click to Show/Hide the Full List
mod site chrX:68201699-68201700:- [4]
Sequence TTCATATCAGGGGCCCTTGGACTTAACACTGAAGTACTGTG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862505
mod ID: M6ASITE092066 Click to Show/Hide the Full List
mod site chrX:68206616-68206617:- [4]
Sequence AGTATGAGAAAGAGACCAAAACACTGACCATGACGCCTATG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000467444.1
External Link RMBase: m6A_site_862506
mod ID: M6ASITE092067 Click to Show/Hide the Full List
mod site chrX:68206622-68206623:- [4]
Sequence ATTGCCAGTATGAGAAAGAGACCAAAACACTGACCATGACG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000467444.1
External Link RMBase: m6A_site_862507
mod ID: M6ASITE092068 Click to Show/Hide the Full List
mod site chrX:68210192-68210193:- [4]
Sequence CAGACATGCAAACTTCCAGGACAGCCAACTATTGAAGGCTA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000467444.1
External Link RMBase: m6A_site_862508
mod ID: M6ASITE092069 Click to Show/Hide the Full List
mod site chrX:68210201-68210202:- [4]
Sequence GAAGCTCCCCAGACATGCAAACTTCCAGGACAGCCAACTAT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000467444.1
External Link RMBase: m6A_site_862509
mod ID: M6ASITE092070 Click to Show/Hide the Full List
mod site chrX:68210209-68210210:- [4]
Sequence GGATGAAAGAAGCTCCCCAGACATGCAAACTTCCAGGACAG
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862510
mod ID: M6ASITE092071 Click to Show/Hide the Full List
mod site chrX:68210240-68210241:- [4]
Sequence ACCCGGGAAGAGATGGAAGAACTTAAGAAAAGGATGAAAGA
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000467444.1; ENST00000355520.6
External Link RMBase: m6A_site_862511
mod ID: M6ASITE092072 Click to Show/Hide the Full List
mod site chrX:68212134-68212135:- [4]
Sequence CAGGATTTCCTCCCATACAAACAACAGCTCCAACTCAGTTT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862512
mod ID: M6ASITE092073 Click to Show/Hide the Full List
mod site chrX:68213955-68213956:- [4]
Sequence ACAGGCAGACCTACAGGTGGACAAGGAGAGGCACAATTTTT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862513
mod ID: M6ASITE092074 Click to Show/Hide the Full List
mod site chrX:68213967-68213968:- [4]
Sequence TTTCCTTCTTCTACAGGCAGACCTACAGGTGGACAAGGAGA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862514
mod ID: M6ASITE092075 Click to Show/Hide the Full List
mod site chrX:68274755-68274756:- [4]
Sequence TTGGAAAATTTCCGGAAGGAACAAATAGGCTTCACCAAGGT
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862515
mod ID: M6ASITE092076 Click to Show/Hide the Full List
mod site chrX:68274779-68274780:- [4]
Sequence GCTAGTGATTTGCTGATTAAACCCTTGGAAAATTTCCGGAA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862516
mod ID: M6ASITE092077 Click to Show/Hide the Full List
mod site chrX:68299029-68299030:- [4]
Sequence TCAGTTTGATTTCATTGGAGACACTCTGACTGATGATGAAA
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000486068.1
External Link RMBase: m6A_site_862517
mod ID: M6ASITE092078 Click to Show/Hide the Full List
mod site chrX:68336434-68336435:- [4]
Sequence CAGCTTCCCAAGTAGCTGGGACTACAGGTGTGTACCACCAC
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000486068.1
External Link RMBase: m6A_site_862518
mod ID: M6ASITE092079 Click to Show/Hide the Full List
mod site chrX:68432926-68432927:- [4]
Sequence ATGAGCAGGAACTGGAGAGGACCAACAAATTCATCAAAGAC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6
External Link RMBase: m6A_site_862519
mod ID: M6ASITE092080 Click to Show/Hide the Full List
mod site chrX:68432936-68432937:- [4]
Sequence CTCAAGTGTTATGAGCAGGAACTGGAGAGGACCAACAAATT
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000491714.1; ENST00000355520.6
External Link RMBase: m6A_site_862520
mod ID: M6ASITE092081 Click to Show/Hide the Full List
mod site chrX:68432979-68432980:- [4]
Sequence GTTCAGCGACTGCTACCTGGACAGCCCCGATTTCCGCGAGA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000491714.1
External Link RMBase: m6A_site_862521
mod ID: M6ASITE092082 Click to Show/Hide the Full List
mod site chrX:68433170-68433171:- [4]
Sequence TCCTCAGGAGTCTCACTGAAACAGGTACCTGTCCTCCAAAG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000491714.1
External Link RMBase: m6A_site_862522
mod ID: M6ASITE092083 Click to Show/Hide the Full List
mod site chrX:68433202-68433203:- [4]
Sequence GGCGCCTGTTCTCTGTCCGGACCAGCCAGCGCTCCTCAGGA
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355520.6; ENST00000491714.1
External Link RMBase: m6A_site_862523
mod ID: M6ASITE092084 Click to Show/Hide the Full List
mod site chrX:68433301-68433302:- [4]
Sequence GGGAAGGCGATGCCTAAGGGACATGCTGCTTGCTAGGCAGC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000491714.1; ENST00000355520.6
External Link RMBase: m6A_site_862524
mod ID: M6ASITE092085 Click to Show/Hide the Full List
mod site chrX:68433637-68433638:- [4]
Sequence CAGCGGGCCCTGGTCAGGAAACTCTAAGGTACAAGGAAAAC
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000491714.1
External Link RMBase: m6A_site_862525
Pseudouridine (Pseudo)
In total 2 m6A sequence/site(s) in this target gene
mod ID: PSESITE000281 Click to Show/Hide the Full List
mod site chrX:68102096-68102097:- [8]
Sequence ATATACTAAAATTGGAACGATACAGAGAAGATTAGCATGGC
Transcript ID List rmsk_3024864; ENST00000516336.1; ENST00000355520.6; ENST00000484842.1
External Link RMBase: Pseudo_site_4913
mod ID: PSESITE000282 Click to Show/Hide the Full List
mod site chrX:68102105-68102106:- [9]
Sequence TGGCAGTACATATACTAAAATTGGAACGATACAGAGAAGAT
Transcript ID List ENST00000516336.1; rmsk_3024864; ENST00000355520.6; ENST00000484842.1
External Link RMBase: Pseudo_site_4914