Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00037)
Target Name UPF1 RNA helicase and ATPase (UPF1)
Synonyms
HUPF1; KIAA0221; NORF1; pNORF1; smg-2; RENT1; regulator of nonsense transcripts 1; UPF1 regulator of nonsense transcripts homolog (yeast); UPF1, RNA helicase and ATPase
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Gene Name UPF1
Sequence
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPGGAGAGAAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSSMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPFSQGALTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY
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Family DNA2/NAM7 helicase family
Function
RNA-dependent helicase required for nonsense-mediated decay (NMD) of aberrant mRNAs containing premature stop codons and modulates the expression level of normal mRNAs (PubMed:11163187, PubMed:16086026, PubMed:18172165, PubMed:21145460, PubMed:21419344, PubMed:24726324). Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD (PubMed:11544179, PubMed:25220460). Recruited by release factors to stalled ribosomes together with the SMG1C protein kinase complex to form the transient SURF (SMG1-UPF1-eRF1-eRF3) complex (PubMed:19417104). In EJC-dependent NMD, the SURF complex associates with the exon junction complex (EJC) (located 50-55 or more nucleotides downstream from the termination codon) through UPF2 and allows the formation of an UPF1-UPF2-UPF3 surveillance complex which is believed to activate NMD (PubMed:21419344). Phosphorylated UPF1 is recognized by EST1B/SMG5, SMG6 and SMG7 which are thought to provide a link to the mRNA degradation machinery involving exonucleolytic and endonucleolytic pathways, and to serve as adapters to protein phosphatase 2A (PP2A), thereby triggering UPF1 dephosphorylation and allowing the recycling of NMD factors (PubMed:12554878). UPF1 can also activate NMD without UPF2 or UPF3, and in the absence of the NMD-enhancing downstream EJC indicative for alternative NMD pathways (PubMed:18447585). Plays a role in replication-dependent histone mRNA degradation at the end of phase S; the function is independent of UPF2 (PubMed:16086026, PubMed:18172165). For the recognition of premature termination codons (PTC) and initiation of NMD a competitive interaction between UPF1 and PABPC1 with the ribosome-bound release factors is proposed (PubMed:18447585, PubMed:25220460). The ATPase activity of UPF1 is required for disassembly of mRNPs undergoing NMD (PubMed:21145460). Together with UPF2 and dependent on TDRD6, mediates the degradation of mRNA harboring long 3'UTR by inducing the NMD machinery (By similarity). Also capable of unwinding double-stranded DNA and translocating on single-stranded DNA (PubMed:30218034).
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Gene ID 5976
HGNC ID HGNC:9962
Ensembl Gene ID ENSG00000005007
KEGG ID hsa:5976
Chromosomal Location 19p13.11
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00037)
UPF1 RNA helicase and ATPase (UPF1)
5-methylcytidine (m5C)
In total 13 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001852 Click to Show/Hide the Full List
mod site chr19:18845970-18845971:+ [1]
Sequence CACTCAGGTGACACTGCGTTCTGCTGCAGGTTGGGCCCGAA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000262803.9; ENST00000601981.5; ENST00000599848.5
External Link RMBase: m5C_site_23659
mod ID: M5CSITE001853 Click to Show/Hide the Full List
mod site chr19:18854231-18854232:+ [1]
Sequence GCCCCTGCTGGCCACATGTGCAGGAGCTCCCGGTGAGGTCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000262803.9; ENST00000601689.1; ENST00000599848.5
External Link RMBase: m5C_site_23660
mod ID: M5CSITE001854 Click to Show/Hide the Full List
mod site chr19:18855226-18855227:+ [2]
Sequence CACCATCGTCTACCACCTGGCCCGGCAAGGCAACGGGTAGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000594243.1; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m5C_site_23661
mod ID: M5CSITE001855 Click to Show/Hide the Full List
mod site chr19:18855227-18855228:+ [2]
Sequence ACCATCGTCTACCACCTGGCCCGGCAAGGCAACGGGTAGGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000599848.5; ENST00000594243.1; ENST00000262803.9
External Link RMBase: m5C_site_23662
mod ID: M5CSITE001856 Click to Show/Hide the Full List
mod site chr19:18855228-18855229:+ [2]
Sequence CCATCGTCTACCACCTGGCCCGGCAAGGCAACGGGTAGGGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000594243.1; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m5C_site_23663
mod ID: M5CSITE001857 Click to Show/Hide the Full List
mod site chr19:18855925-18855926:+ [2]
Sequence TGCCCCAATGGTGTTGCAGGCCGGTGCTGGTGTGTGCTCCG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m5C_site_23664
mod ID: M5CSITE001858 Click to Show/Hide the Full List
mod site chr19:18857509-18857510:+ [1]
Sequence CAACATCTTCTACGAGGGCTCCCTCCAGAATGGTGTCACTG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m5C_site_23665
mod ID: M5CSITE001859 Click to Show/Hide the Full List
mod site chr19:18867408-18867409:+ [2]
Sequence GTGAGGAAGGTGCTTTTGGCCCCATTGCGAGGGGCCTTGGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000599848.5; ENST00000600689.1; ENST00000596842.5; ENST00000262803.9
External Link RMBase: m5C_site_23666
mod ID: M5CSITE001860 Click to Show/Hide the Full List
mod site chr19:18867409-18867410:+ [2]
Sequence TGAGGAAGGTGCTTTTGGCCCCATTGCGAGGGGCCTTGGCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000596842.5; ENST00000262803.9; ENST00000600689.1; ENST00000599848.5
External Link RMBase: m5C_site_23667
mod ID: M5CSITE001861 Click to Show/Hide the Full List
mod site chr19:18867410-18867411:+ [2]
Sequence GAGGAAGGTGCTTTTGGCCCCATTGCGAGGGGCCTTGGCCA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000600689.1; ENST00000599848.5; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m5C_site_23668
mod ID: M5CSITE001862 Click to Show/Hide the Full List
mod site chr19:18867422-18867423:+ [2]
Sequence TTTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCCTG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000600689.1; ENST00000596842.5; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m5C_site_23669
mod ID: M5CSITE001863 Click to Show/Hide the Full List
mod site chr19:18867423-18867424:+ [2]
Sequence TTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCCTGT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000600689.1; ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m5C_site_23670
mod ID: M5CSITE001864 Click to Show/Hide the Full List
mod site chr19:18867490-18867491:+ [1]
Sequence CCCGGATTGACGGCTTTTTCCCGGGGGCCTTTGGAAGATTT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000600689.1; ENST00000596842.5; ENST00000599848.5; ENST00000262803.9
External Link RMBase: m5C_site_23671
N6-methyladenosine (m6A)
In total 104 m6A sequence/site(s) in this target gene
mod ID: M6ASITE040574 Click to Show/Hide the Full List
mod site chr19:18832179-18832180:+ [3]
Sequence GGGCTCGAGTGCAGCGCGGAACCGGCCCGAGGGCCCTACCC
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; GM12878; LCLs; MT4; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429206
mod ID: M6ASITE040575 Click to Show/Hide the Full List
mod site chr19:18832242-18832243:+ [3]
Sequence CGTACGGGCCCAGCTCGCAGACTCTCACTTTCCTGGACACG
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429207
mod ID: M6ASITE040576 Click to Show/Hide the Full List
mod site chr19:18832258-18832259:+ [3]
Sequence GCAGACTCTCACTTTCCTGGACACGGAGGAGGCCGAGCTGC
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hESCs; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429208
mod ID: M6ASITE040577 Click to Show/Hide the Full List
mod site chr19:18832424-18832425:+ [3]
Sequence GGCGCGGGCGCTGCGGCGGGACAGCTCGACGCGCAGGTGAG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; A549; U2OS; GSC-11; HEK293T; HEK293A-TOA; iSLK; TIME; TREX; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429209
mod ID: M6ASITE040578 Click to Show/Hide the Full List
mod site chr19:18846033-18846034:+ [3]
Sequence TGGACGACAGTGTAGCCAAGACCAGCCAGTTGTTGGCTGAG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000601981.5; ENST00000262803.9
External Link RMBase: m6A_site_429210
mod ID: M6ASITE040579 Click to Show/Hide the Full List
mod site chr19:18846058-18846059:+ [3]
Sequence CCAGTTGTTGGCTGAGTTGAACTTCGAGGAAGATGAAGAAG
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000601981.5
External Link RMBase: m6A_site_429211
mod ID: M6ASITE040580 Click to Show/Hide the Full List
mod site chr19:18846079-18846080:+ [3]
Sequence CTTCGAGGAAGATGAAGAAGACACCTATTACACGAAGGACC
Motif Score 2.897386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000601981.5; ENST00000262803.9
External Link RMBase: m6A_site_429212
mod ID: M6ASITE040581 Click to Show/Hide the Full List
mod site chr19:18846097-18846098:+ [3]
Sequence AGACACCTATTACACGAAGGACCTCCCCATACACGCCTGCA
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000601981.5; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429213
mod ID: M6ASITE040582 Click to Show/Hide the Full List
mod site chr19:18847755-18847756:+ [4]
Sequence TTTTTTAGTTACTGTGGAATACACGATCCTGCCTGCGTGGT
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000601981.5; ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429214
mod ID: M6ASITE040583 Click to Show/Hide the Full List
mod site chr19:18849331-18849332:+ [3]
Sequence CGTGTTCAGAGCTGCTGGAGACACCGGAAGAGCCCAAAGGC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000601981.5; ENST00000598209.5; ENST00000600868.5; ENST00000599848.5; ENST00000594504.5; ENST00000600012.5; ENST00000600310.5
External Link RMBase: m6A_site_429215
mod ID: M6ASITE040584 Click to Show/Hide the Full List
mod site chr19:18849975-18849976:+ [3]
Sequence GTGACTGCCTCTGCTAATGGACCGTGAACGGTACCGGAACT
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000600868.5; ENST00000599848.5; ENST00000598471.1; ENST00000600012.5; ENST00000600310.5; ENST00000594504.5; ENST00000601981.5; ENST00000598209.5
External Link RMBase: m6A_site_429216
mod ID: M6ASITE040585 Click to Show/Hide the Full List
mod site chr19:18850076-18850077:+ [4]
Sequence ATCATTTCCTGGTTTCAGCCACATTGTAAATCACCTTGTGA
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9; ENST00000600012.5; ENST00000598471.1; ENST00000601981.5; ENST00000594504.5; ENST00000600868.5; ENST00000600310.5; ENST00000598209.5
External Link RMBase: m6A_site_429217
mod ID: M6ASITE040586 Click to Show/Hide the Full List
mod site chr19:18850124-18850125:+ [4]
Sequence ATGCAAAGAGGTGACCCTGCACAAGGACGGGCCCCTGGGGG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000598471.1; ENST00000599848.5; ENST00000262803.9; ENST00000594504.5; ENST00000600310.5; ENST00000600012.5; ENST00000598209.5; ENST00000601981.5; ENST00000600868.5
External Link RMBase: m6A_site_429218
mod ID: M6ASITE040587 Click to Show/Hide the Full List
mod site chr19:18850147-18850148:+ [3]
Sequence AGGACGGGCCCCTGGGGGAGACAGTCCTGGAGTGCTACAAC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000594504.5; ENST00000600868.5; ENST00000598209.5; ENST00000600310.5; ENST00000600012.5; ENST00000601981.5; ENST00000262803.9; ENST00000598471.1; ENST00000599848.5
External Link RMBase: m6A_site_429219
mod ID: M6ASITE040588 Click to Show/Hide the Full List
mod site chr19:18850163-18850164:+ [4]
Sequence GGAGACAGTCCTGGAGTGCTACAACTGCGGCTGTCGCAACG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000262803.9; ENST00000598471.1; ENST00000600310.5; ENST00000600012.5; ENST00000601981.5; ENST00000598209.5; ENST00000594504.5; ENST00000600868.5; ENST00000599848.5
External Link RMBase: m6A_site_429220
mod ID: M6ASITE040589 Click to Show/Hide the Full List
mod site chr19:18850719-18850720:+ [3]
Sequence CAGCCAGAGCAGCCTCAAGGACATCAACTGGGACAGCTCGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; hESC-HEK293T; CD4T; peripheral-blood; endometrial; HEC-1-A; MM6
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000600868.5; ENST00000598209.5; ENST00000600310.5; ENST00000262803.9; ENST00000600012.5; ENST00000599848.5; ENST00000598471.1; ENST00000594504.5
External Link RMBase: m6A_site_429221
mod ID: M6ASITE040590 Click to Show/Hide the Full List
mod site chr19:18850731-18850732:+ [3]
Sequence CCTCAAGGACATCAACTGGGACAGCTCGCAGTGGCAGCCGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000600310.5; ENST00000598209.5; ENST00000599848.5; ENST00000594504.5; ENST00000600868.5; ENST00000600012.5; ENST00000598471.1; ENST00000262803.9
External Link RMBase: m6A_site_429222
mod ID: M6ASITE040591 Click to Show/Hide the Full List
mod site chr19:18850761-18850762:+ [3]
Sequence GTGGCAGCCGCTGATCCAGGACCGCTGCTTCCTGTCCTGGC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000598471.1; ENST00000600310.5; ENST00000600012.5; ENST00000598209.5; ENST00000594504.5; ENST00000600868.5; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429223
mod ID: M6ASITE040592 Click to Show/Hide the Full List
mod site chr19:18850845-18850846:+ [4]
Sequence GATCACGGCACAGCAGATCAACAAGCTGGAGGAGCTGTGGA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000600310.5; ENST00000262803.9; ENST00000598471.1; ENST00000598209.5; ENST00000599848.5; ENST00000600012.5; ENST00000600868.5
External Link RMBase: m6A_site_429224
mod ID: M6ASITE040593 Click to Show/Hide the Full List
mod site chr19:18852138-18852139:+ [3]
Sequence TGTTGTTGTCTTCTAGGAAAACCCTTCTGCCACGCTGGAGG
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; MM6; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000598209.5; ENST00000600310.5; ENST00000598471.1; ENST00000262803.9; ENST00000600868.5; ENST00000600012.5
External Link RMBase: m6A_site_429225
mod ID: M6ASITE040594 Click to Show/Hide the Full List
mod site chr19:18852159-18852160:+ [3]
Sequence CCCTTCTGCCACGCTGGAGGACCTGGAGAAGCCGGGGGTGG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; MM6; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000600868.5; ENST00000598471.1; ENST00000600012.5; ENST00000600310.5; ENST00000598209.5; ENST00000599848.5
External Link RMBase: m6A_site_429226
mod ID: M6ASITE040595 Click to Show/Hide the Full List
mod site chr19:18852234-18852235:+ [3]
Sequence GGACGCCTACCAGTACCAGAACATATTCGGGCCCCTGGTCA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; hESC-HEK293T; CD4T; peripheral-blood; endometrial; HEC-1-A
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000600310.5; ENST00000599848.5; ENST00000600868.5; ENST00000598209.5; ENST00000262803.9
External Link RMBase: m6A_site_429227
mod ID: M6ASITE040596 Click to Show/Hide the Full List
mod site chr19:18853014-18853015:+ [3]
Sequence TAACATCACTGTCAGGTGGGACCTGGGCCTTAACAAGAAGA
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000601689.1; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429228
mod ID: M6ASITE040597 Click to Show/Hide the Full List
mod site chr19:18853026-18853027:+ [4]
Sequence CAGGTGGGACCTGGGCCTTAACAAGAAGAGAATCGCCTACT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000601689.1; ENST00000262803.9
External Link RMBase: m6A_site_429229
mod ID: M6ASITE040598 Click to Show/Hide the Full List
mod site chr19:18853061-18853062:+ [3]
Sequence CCTACTTCACTTTGCCCAAGACTGACTCTGGTAATGAGGAT
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000601689.1; ENST00000599848.5
External Link RMBase: m6A_site_429230
mod ID: M6ASITE040599 Click to Show/Hide the Full List
mod site chr19:18853251-18853252:+ [4]
Sequence TCTCACTTTTTTACCTCAAGACATGCGGCTCATGCAGGGGG
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000601689.1; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429231
mod ID: M6ASITE040600 Click to Show/Hide the Full List
mod site chr19:18853290-18853291:+ [4]
Sequence GGATGAGATATGCCTGCGGTACAAAGGGGACCTTGCGCCCC
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000601689.1; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429232
mod ID: M6ASITE040601 Click to Show/Hide the Full List
mod site chr19:18853299-18853300:+ [3]
Sequence ATGCCTGCGGTACAAAGGGGACCTTGCGCCCCTGTGGAAAG
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000601689.1; ENST00000262803.9
External Link RMBase: m6A_site_429233
mod ID: M6ASITE040602 Click to Show/Hide the Full List
mod site chr19:18854663-18854664:+ [4]
Sequence TGCACCTGTGGAGGTGACTCACAACTTCCAGGTGGATTTTG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9; ENST00000601689.1
External Link RMBase: m6A_site_429234
mod ID: M6ASITE040603 Click to Show/Hide the Full List
mod site chr19:18854915-18854916:+ [3]
Sequence AAACGTTTGCCGTGGATGAGACCTCGGTGTCTGGCTACATC
Motif Score 2.876744048
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000601689.1; ENST00000599848.5; ENST00000594243.1; ENST00000262803.9
External Link RMBase: m6A_site_429235
mod ID: M6ASITE040604 Click to Show/Hide the Full List
mod site chr19:18854931-18854932:+ [4]
Sequence TGAGACCTCGGTGTCTGGCTACATCTACCACAAGCTGTTGG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000594243.1; ENST00000262803.9; ENST00000599848.5; ENST00000601689.1
External Link RMBase: m6A_site_429236
mod ID: M6ASITE040605 Click to Show/Hide the Full List
mod site chr19:18854940-18854941:+ [4]
Sequence GGTGTCTGGCTACATCTACCACAAGCTGTTGGGCCACGAGG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000594243.1; ENST00000262803.9; ENST00000601689.1
External Link RMBase: m6A_site_429237
mod ID: M6ASITE040606 Click to Show/Hide the Full List
mod site chr19:18855138-18855139:+ [3]
Sequence TGAAGGTTTATGCCGTGAAGACTGTGCTGCAAAGACCACTG
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000601689.1; ENST00000594243.1; ENST00000262803.9
External Link RMBase: m6A_site_429238
mod ID: M6ASITE040607 Click to Show/Hide the Full List
mod site chr19:18855152-18855153:+ [3]
Sequence GTGAAGACTGTGCTGCAAAGACCACTGAGCCTGATCCAGGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000601689.1; ENST00000594243.1; ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429239
mod ID: M6ASITE040608 Click to Show/Hide the Full List
mod site chr19:18855271-18855272:+ [3]
Sequence ACACGGCCCTTGCGGGCAAGACCCGGGAGGGCTTTAGGGTG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000594243.1; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429240
mod ID: M6ASITE040609 Click to Show/Hide the Full List
mod site chr19:18855459-18855460:+ [5]
Sequence GTCTGCTACTGGTTTAGAAAACTGGGGGCAGGGGGGGCATG
Motif Score 2.627720238
Cell/Tissue List HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000594243.1; ENST00000599848.5
External Link RMBase: m6A_site_429241
mod ID: M6ASITE040610 Click to Show/Hide the Full List
mod site chr19:18855660-18855661:+ [3]
Sequence GGAGTTTAAGGCCAGCCTGAACAGGGTGAGACGTCTCTACA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; rmsk_4959754; ENST00000262803.9; ENST00000594243.1
External Link RMBase: m6A_site_429242
mod ID: M6ASITE040611 Click to Show/Hide the Full List
mod site chr19:18855950-18855951:+ [4]
Sequence GCTGGTGTGTGCTCCGAGCAACATCGCCGTGGACCAGCTAA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429243
mod ID: M6ASITE040612 Click to Show/Hide the Full List
mod site chr19:18855962-18855963:+ [3]
Sequence TCCGAGCAACATCGCCGTGGACCAGCTAACGGAGAAGATCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429244
mod ID: M6ASITE040613 Click to Show/Hide the Full List
mod site chr19:18856064-18856065:+ [4]
Sequence GGTGTCTTTTCTGGCCCTGCACAACCAGATCAGGAACATGG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429245
mod ID: M6ASITE040614 Click to Show/Hide the Full List
mod site chr19:18856079-18856080:+ [3]
Sequence CCTGCACAACCAGATCAGGAACATGGACAGGTGTGTGTCGA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429246
mod ID: M6ASITE040615 Click to Show/Hide the Full List
mod site chr19:18856085-18856086:+ [3]
Sequence CAACCAGATCAGGAACATGGACAGGTGTGTGTCGAGTCCAT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429247
mod ID: M6ASITE040616 Click to Show/Hide the Full List
mod site chr19:18856225-18856226:+ [3]
Sequence TGCAGCAGCTGAAAGACGAGACTGGGGAGCTGTCGTCTGCC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429248
mod ID: M6ASITE040617 Click to Show/Hide the Full List
mod site chr19:18857491-18857492:+ [4]
Sequence ACTCAGCGCCTTCCCATCCAACATCTTCTACGAGGGCTCCC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429249
mod ID: M6ASITE040618 Click to Show/Hide the Full List
mod site chr19:18857607-18857608:+ [6]
Sequence ATGTGGACTGGGGAGAAGGAACTGGCCCATCAGCTTCCCCT
Motif Score 3.373380952
Cell/Tissue List CD8T
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429250
mod ID: M6ASITE040619 Click to Show/Hide the Full List
mod site chr19:18858571-18858572:+ [6]
Sequence ATGTGGCCTCAGGGCTGGAGACTCCCAGCCATGCAGAAAGG
Motif Score 3.319380952
Cell/Tissue List CD8T
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429251
mod ID: M6ASITE040620 Click to Show/Hide the Full List
mod site chr19:18858680-18858681:+ [6]
Sequence CCCAGAGCCCAGGAGGGTGGACTGAGCAGAGGTGGACCCCA
Motif Score 4.065041667
Cell/Tissue List CD8T
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000262803.9; rmsk_4959756; ENST00000599848.5
External Link RMBase: m6A_site_429252
mod ID: M6ASITE040621 Click to Show/Hide the Full List
mod site chr19:18859410-18859411:+ [3]
Sequence TTTGGATAGCCAGCACCTGAACCCAGAACCACCTGACCAGC
Motif Score 2.930744048
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429253
mod ID: M6ASITE040622 Click to Show/Hide the Full List
mod site chr19:18859417-18859418:+ [3]
Sequence AGCCAGCACCTGAACCCAGAACCACCTGACCAGCTGTGAGA
Motif Score 2.930744048
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429254
mod ID: M6ASITE040623 Click to Show/Hide the Full List
mod site chr19:18859506-18859507:+ [3]
Sequence AGCAGCCCCTGGGCTGAGGGACTTCTGAGCTCATCCGGCGG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5
External Link RMBase: m6A_site_429255
mod ID: M6ASITE040624 Click to Show/Hide the Full List
mod site chr19:18859650-18859651:+ [3]
Sequence CAGGCTGGTGCTGTGCAAAAACACCGGTTTTCTCCACTGAT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000262803.9
External Link RMBase: m6A_site_429256
mod ID: M6ASITE040625 Click to Show/Hide the Full List
mod site chr19:18859714-18859715:+ [3]
Sequence GGGCACCTGTGAATTGAGAAACTGGTTTTACAGTTTTAAGG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000262803.9
External Link RMBase: m6A_site_429257
mod ID: M6ASITE040626 Click to Show/Hide the Full List
mod site chr19:18859899-18859900:+ [3]
Sequence CAGGCCCTCAGCAGGAATGGACAAGGCTGCAGGGCAGGGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429258
mod ID: M6ASITE040627 Click to Show/Hide the Full List
mod site chr19:18859920-18859921:+ [3]
Sequence CAAGGCTGCAGGGCAGGGGGACACTGTTGGCTCAACAGTGT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; peripheral-blood; GSC-11; HEK293A-TOA; MSC; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596842.5; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429259
mod ID: M6ASITE040628 Click to Show/Hide the Full List
mod site chr19:18860062-18860063:+ [3]
Sequence GCAAGAAAGCCCTGGCTGAGACCCTGTTCCCTGTTCAGGGG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429260
mod ID: M6ASITE040629 Click to Show/Hide the Full List
mod site chr19:18860165-18860166:+ [3]
Sequence TGGGCATCTCTGGCCAGGGGACCGGCTCAGGTGACCTCACC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429261
mod ID: M6ASITE040630 Click to Show/Hide the Full List
mod site chr19:18860369-18860370:+ [3]
Sequence CAGTGGCCCCAACCCGATAAACCGATGTTCTTCTACGTGAC
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000596842.5; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429262
mod ID: M6ASITE040631 Click to Show/Hide the Full List
mod site chr19:18860434-18860435:+ [3]
Sequence CTCGGGCACCTCCTACCTGAACAGGTGAGCAGGGACAGGCC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429263
mod ID: M6ASITE040632 Click to Show/Hide the Full List
mod site chr19:18860887-18860888:+ [3]
Sequence GAAGGCAGGCGCCAAGCCGGACCAGATTGGCATCATCACGC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Huh7; peripheral-blood
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429264
mod ID: M6ASITE040633 Click to Show/Hide the Full List
mod site chr19:18860941-18860942:+ [4]
Sequence GCGCTCCTACCTGGTGCAGTACATGCAGTTCAGCGGCTCCC
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000262803.9
External Link RMBase: m6A_site_429265
mod ID: M6ASITE040634 Click to Show/Hide the Full List
mod site chr19:18860965-18860966:+ [4]
Sequence GCAGTTCAGCGGCTCCCTGCACACCAAGCTCTACCAGGTGC
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5
External Link RMBase: m6A_site_429266
mod ID: M6ASITE040635 Click to Show/Hide the Full List
mod site chr19:18862055-18862056:+ [3]
Sequence CTTTCAGGGACGCGAGAAGGACTTCATCATCCTGTCCTGTG
Motif Score 4.065041667
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000262803.9
External Link RMBase: m6A_site_429267
mod ID: M6ASITE040636 Click to Show/Hide the Full List
mod site chr19:18863547-18863548:+ [4]
Sequence GCTGGTGGAGGGGCCGCTCAACAACCTGCGTGAGAGCCTCA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5; ENST00000600689.1
External Link RMBase: m6A_site_429268
mod ID: M6ASITE040637 Click to Show/Hide the Full List
mod site chr19:18863598-18863599:+ [4]
Sequence CAAGCCACGGAAGCTGGTCAACACTATCAACCCGGTGAGCG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596842.5; ENST00000600689.1; ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429269
mod ID: M6ASITE040638 Click to Show/Hide the Full List
mod site chr19:18865314-18865315:+ [3]
Sequence CTTCCAGCATGTACTTCCAGACCCATGACCAGATTGGCATG
Motif Score 2.876744048
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000600689.1; ENST00000596842.5
External Link RMBase: m6A_site_429270
mod ID: M6ASITE040639 Click to Show/Hide the Full List
mod site chr19:18865369-18865370:+ [3]
Sequence TAGCCACGTGGCTGCCATGAACATTCCCATCCCCTTCAACC
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; Huh7
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000262803.9; ENST00000600689.1
External Link RMBase: m6A_site_429271
mod ID: M6ASITE040640 Click to Show/Hide the Full List
mod site chr19:18865427-18865428:+ [3]
Sequence CCACCGCCTGGCTATTTTGGACAAGCCAACGGGCCTGCTGC
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T; Huh7
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000599848.5; ENST00000600689.1
External Link RMBase: m6A_site_429272
mod ID: M6ASITE040641 Click to Show/Hide the Full List
mod site chr19:18865545-18865546:+ [3]
Sequence CCTCCTTCGGATCACCCTGGACTGCTGTCTTTCAGGGCGAG
Motif Score 4.065041667
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000600689.1; ENST00000599848.5; ENST00000596842.5
External Link RMBase: m6A_site_429273
mod ID: M6ASITE040642 Click to Show/Hide the Full List
mod site chr19:18865583-18865584:+ [3]
Sequence GAGGCACCCCGAAAGGCAAGACTGGTCGTGGGGGACGCCAG
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; MT4; peripheral-blood; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262803.9; ENST00000600689.1; ENST00000599848.5; ENST00000596842.5
External Link RMBase: m6A_site_429274
mod ID: M6ASITE040643 Click to Show/Hide the Full List
mod site chr19:18865608-18865609:+ [3]
Sequence TCGTGGGGGACGCCAGAAGAACCGCTTTGGGCTTCCTGGAC
Motif Score 2.930744048
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000262803.9; ENST00000600689.1; ENST00000599848.5; ENST00000596842.5
External Link RMBase: m6A_site_429275
mod ID: M6ASITE040644 Click to Show/Hide the Full List
mod site chr19:18865627-18865628:+ [3]
Sequence AACCGCTTTGGGCTTCCTGGACCCAGCCAGACTAACCTCCC
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000599848.5; ENST00000600689.1; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429276
mod ID: M6ASITE040645 Click to Show/Hide the Full List
mod site chr19:18865637-18865638:+ [3]
Sequence GGCTTCCTGGACCCAGCCAGACTAACCTCCCCAACAGCCAA
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000600689.1; ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429277
mod ID: M6ASITE040646 Click to Show/Hide the Full List
mod site chr19:18865713-18865714:+ [4]
Sequence GGGCGCCCTGACGCAGGGCTACATCTCCATGAGCCAGCCTT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000599848.5; ENST00000600689.1
External Link RMBase: m6A_site_429278
mod ID: M6ASITE040647 Click to Show/Hide the Full List
mod site chr19:18866098-18866099:+ [3]
Sequence CGACGTGGCGCTCTCACAGGACTCCACGTACCAGGGAGAGC
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000600689.1; ENST00000262803.9; ENST00000599848.5; ENST00000596842.5
External Link RMBase: m6A_site_429279
mod ID: M6ASITE040648 Click to Show/Hide the Full List
mod site chr19:18866620-18866621:+ [3]
Sequence ACCTGTTTTCCACTGCTAAAACTGAAGCACCACTGTGTGAG
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HEK293T; U2OS; H1A; H1B; hESCs; A549; LCLs; H1299; Huh7; Jurkat; GSC-11; TREX
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5; ENST00000600689.1
External Link RMBase: m6A_site_429280
mod ID: M6ASITE040649 Click to Show/Hide the Full List
mod site chr19:18866631-18866632:+ [7]
Sequence ACTGCTAAAACTGAAGCACCACTGTGTGAGCAACAGGAAGG
Motif Score 2.475107143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000599848.5; ENST00000600689.1; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429281
mod ID: M6ASITE040650 Click to Show/Hide the Full List
mod site chr19:18866643-18866644:+ [7]
Sequence GAAGCACCACTGTGTGAGCAACAGGAAGGGAGAGCGCACGA
Motif Score 2.173910714
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000600689.1; ENST00000596842.5; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429282
mod ID: M6ASITE040651 Click to Show/Hide the Full List
mod site chr19:18866812-18866813:+ [3]
Sequence GCCAGGGCGGAGGGAGGAAGACCCTCATCTCAGAGTAGCCC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; LCLs; H1299; MM6; Huh7; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596842.5; ENST00000600689.1; ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429283
mod ID: M6ASITE040652 Click to Show/Hide the Full List
mod site chr19:18866877-18866878:+ [3]
Sequence TTCTCTTTGATTGAAAGGGGACTACGTCTTAGCAGGAAAAA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000600689.1; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429284
mod ID: M6ASITE040653 Click to Show/Hide the Full List
mod site chr19:18866900-18866901:+ [3]
Sequence ACGTCTTAGCAGGAAAAAAAACTTCGCATTTCTGTGCCCGA
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000599848.5; ENST00000262803.9; ENST00000596842.5; ENST00000600689.1
External Link RMBase: m6A_site_429285
mod ID: M6ASITE040654 Click to Show/Hide the Full List
mod site chr19:18866938-18866939:+ [3]
Sequence CGAGCAGGCTCCTTGCAAAGACAGCAGCGTGCGGGGCAGAG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000600689.1; ENST00000596842.5; ENST00000262803.9; ENST00000599848.5
External Link RMBase: m6A_site_429286
mod ID: M6ASITE040655 Click to Show/Hide the Full List
mod site chr19:18867099-18867100:+ [7]
Sequence CAAGATTCTTTTAAAGGAGTACTGAAGAATACTTTCCTAAG
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000600689.1; ENST00000599848.5
External Link RMBase: m6A_site_429287
mod ID: M6ASITE040656 Click to Show/Hide the Full List
mod site chr19:18867109-18867110:+ [7]
Sequence TTAAAGGAGTACTGAAGAATACTTTCCTAAGTTTGTCTGTA
Motif Score 2.53247619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000599848.5; ENST00000600689.1; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429288
mod ID: M6ASITE040657 Click to Show/Hide the Full List
mod site chr19:18867145-18867146:+ [3]
Sequence CTGTAAAATCTTAGCGGTGGACCTGGGAGATTTGAGAAGCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; GM12878; A549; MT4; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000600689.1; ENST00000262803.9
External Link RMBase: m6A_site_429289
mod ID: M6ASITE040658 Click to Show/Hide the Full List
mod site chr19:18867173-18867174:+ [3]
Sequence GATTTGAGAAGCTTCCAGAAACAGTTTAAACAAGCCAGCGC
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; HepG2; U2OS; hNPCs; A549; GM12878; MT4; MM6; iSLK; TREX
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000600689.1; ENST00000262803.9; ENST00000599848.5; ENST00000596842.5
External Link RMBase: m6A_site_429290
mod ID: M6ASITE040659 Click to Show/Hide the Full List
mod site chr19:18867182-18867183:+ [3]
Sequence AGCTTCCAGAAACAGTTTAAACAAGCCAGCGCTACTGGAGA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; hNPCs; A549; GM12878; MT4; MM6; iSLK; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000596842.5; ENST00000599848.5; ENST00000262803.9; ENST00000600689.1
External Link RMBase: m6A_site_429291
mod ID: M6ASITE040660 Click to Show/Hide the Full List
mod site chr19:18867336-18867337:+ [3]
Sequence AGCTGCTCGTTCTCCGCTGGACTCAGAAGCCAAGCTGCTTC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000600689.1; ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429292
mod ID: M6ASITE040661 Click to Show/Hide the Full List
mod site chr19:18867365-18867366:+ [3]
Sequence CCAAGCTGCTTCCCGCCTAGACTCGGCGCAGGGCCCCGCAC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000600689.1; ENST00000262803.9
External Link RMBase: m6A_site_429293
mod ID: M6ASITE040662 Click to Show/Hide the Full List
mod site chr19:18867433-18867434:+ [3]
Sequence TGCGAGGGGCCTTGGCCAGGACTGGCCCTGTGGCCAGGAGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000600689.1; ENST00000262803.9
External Link RMBase: m6A_site_429294
mod ID: M6ASITE040663 Click to Show/Hide the Full List
mod site chr19:18867479-18867480:+ [7]
Sequence AGGTGGCTGTTCCCGGATTGACGGCTTTTTCCCGGGGGCCT
Motif Score 2.833690476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000262803.9; ENST00000600689.1; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429295
mod ID: M6ASITE040664 Click to Show/Hide the Full List
mod site chr19:18867520-18867521:+ [3]
Sequence TTGGAAGATTTGGTGGAAGGACAAGAGGGCCTGTCCCTGTC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5; ENST00000600689.1
External Link RMBase: m6A_site_429296
mod ID: M6ASITE040665 Click to Show/Hide the Full List
mod site chr19:18867581-18867582:+ [3]
Sequence ACAGTCCCTGTGCTGGTTAGACACGGAGCGCTGCACACCGA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000600689.1; ENST00000596842.5; ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429297
mod ID: M6ASITE040666 Click to Show/Hide the Full List
mod site chr19:18867595-18867596:+ [4]
Sequence GGTTAGACACGGAGCGCTGCACACCGAAAGCCCAAATTGGG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000600689.1; ENST00000596842.5; ENST00000599848.5; ENST00000262803.9
External Link RMBase: m6A_site_429298
mod ID: M6ASITE040667 Click to Show/Hide the Full List
mod site chr19:18867597-18867598:+ [7]
Sequence TTAGACACGGAGCGCTGCACACCGAAAGCCCAAATTGGGAG
Motif Score 2.064285714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5; ENST00000600689.1
External Link RMBase: m6A_site_429299
mod ID: M6ASITE040668 Click to Show/Hide the Full List
mod site chr19:18867633-18867634:+ [7]
Sequence GGGAGCTCTGCCTGCCGGCAACTTTGCTGATGGGGTGATTG
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000600689.1; ENST00000262803.9; ENST00000596842.5; ENST00000599848.5
External Link RMBase: m6A_site_429300
mod ID: M6ASITE040669 Click to Show/Hide the Full List
mod site chr19:18867675-18867676:+ [3]
Sequence TGCTTCTGGGGGGTAAGGAAACAAGTTACAGAAATTACCGC
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5; ENST00000600689.1
External Link RMBase: m6A_site_429301
mod ID: M6ASITE040670 Click to Show/Hide the Full List
mod site chr19:18867711-18867712:+ [3]
Sequence ACCGCGTTCTGTGTGAAGGGACTGAGGGTGTGGTGTCATTG
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000596842.5; ENST00000262803.9; ENST00000600689.1; ENST00000599848.5
External Link RMBase: m6A_site_429302
mod ID: M6ASITE040671 Click to Show/Hide the Full List
mod site chr19:18867860-18867861:+ [3]
Sequence TGTCACTGGCCCTGATCCGAACACCTCCAGATTCCGGCTTC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hESCs; GM12878; LCLs; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000262803.9; ENST00000596842.5; ENST00000599848.5; ENST00000600689.1
External Link RMBase: m6A_site_429303
mod ID: M6ASITE040672 Click to Show/Hide the Full List
mod site chr19:18867889-18867890:+ [3]
Sequence GATTCCGGCTTCTACATGGGACAGACGGGGACGCACAGGCC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hESCs; GM12878; LCLs; CD8T; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000599848.5; ENST00000596842.5; ENST00000600689.1; ENST00000262803.9
External Link RMBase: m6A_site_429304
mod ID: M6ASITE040673 Click to Show/Hide the Full List
mod site chr19:18867928-18867929:+ [3]
Sequence CCACCTTCCTTCTGGCAGGGACTCTTATTTATTCCCATTGC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; GM12878; LCLs; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000599848.5; ENST00000600689.1; ENST00000596842.5; ENST00000262803.9
External Link RMBase: m6A_site_429305
mod ID: M6ASITE040674 Click to Show/Hide the Full List
mod site chr19:18868132-18868133:+ [4]
Sequence GCTTTGTAGCAGCAGCCTTGACAAACCCAGGCGCACTGTAC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000596842.5; ENST00000262803.9; ENST00000599848.5; ENST00000600689.1
External Link RMBase: m6A_site_429306
mod ID: M6ASITE040675 Click to Show/Hide the Full List
mod site chr19:18868136-18868137:+ [3]
Sequence TGTAGCAGCAGCCTTGACAAACCCAGGCGCACTGTACCAAG
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000599848.5; ENST00000600689.1; ENST00000262803.9; ENST00000596842.5
External Link RMBase: m6A_site_429307
mod ID: M6ASITE040676 Click to Show/Hide the Full List
mod site chr19:18868165-18868166:+ [7]
Sequence CACTGTACCAAGGCAATGTAACTTTTGATTTTCGGTCAATT
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000596842.5; ENST00000262803.9; ENST00000599848.5; ENST00000600689.1
External Link RMBase: m6A_site_429308
mod ID: M6ASITE040677 Click to Show/Hide the Full List
mod site chr19:18868215-18868216:+ [3]
Sequence TTGTCACCAAATATTAATAAACAGTTTTGACTTCACACCAA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000262803.9; ENST00000599848.5; ENST00000596842.5; ENST00000600689.1
External Link RMBase: m6A_site_429309
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000123 Click to Show/Hide the Full List
mod site chr19:18867354-18867355:+ [8]
Sequence GGACTCAGAAGCCAAGCTGCTTCCCGCCTAGACTCGGCGCA
Transcript ID List ENST00000596842.5; ENST00000599848.5; ENST00000262803.9; ENST00000600689.1
External Link RMBase: Pseudo_site_2461