General Information of the Epigenetic Target (ID: EPITAR00032)
Target Name Cyclin-dependent kinase 2 (CDK2)
Synonyms
Cell division protein kinase 2; p33 protein kinase; CDKN2
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Gene Name CDK2
Sequence
MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL
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Family Protein kinase superfamily; CMGC Ser/Thr protein kinase family; CDC2/CDKX subfamily
Function
Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization. Phosphorylates FOXP3 and negatively regulates its transcriptional activity and protein stability (By similarity). Phosphorylates CDK2AP2. Phosphorylates ERCC6 which is essential for its chromatin remodeling activity at DNA double-strand breaks.
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Gene ID 1017
HGNC ID HGNC:1771
Ensembl Gene ID ENSG00000123374
KEGG ID hsa:1017
Chromosomal Location 12q13.2
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00032)
Cyclin-dependent kinase 2 (CDK2)
5-methylcytidine (m5C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000048 Click to Show/Hide the Full List
mod site chr12:55966918-55966919:+ [1]
Sequence GTACTGGGCCCTGTTTCCCCCTCCTCGGCCCCCGAGAGCCA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000354056.4; ENST00000555357.1; ENST00000440311.6; ENST00000555408.5; ENST00000556464.5; ENST00000554619.5; ENST00000553376.5; ENST00000266970.9
External Link RMBase: m5C_site_10322
mod ID: M5CSITE000049 Click to Show/Hide the Full List
mod site chr12:55972417-55972418:+ [1]
Sequence ATCCCATTTTCCTCTGACGTCCACCTCCTACCCCATAGGAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000266970.9
External Link RMBase: m5C_site_10323
N6-methyladenosine (m6A)
In total 40 m6A sequence/site(s) in this target gene
mod ID: M6ASITE013254 Click to Show/Hide the Full List
mod site chr12:55966809-55966810:+ [2]
Sequence GCCTCTGGTGGCGGTCGGGAACTCGGTGGGAGGCGGCAACA
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000555408.5; ENST00000556464.5
External Link RMBase: m6A_site_192290
mod ID: M6ASITE013255 Click to Show/Hide the Full List
mod site chr12:55966852-55966853:+ [3]
Sequence GTTTCAAGTTGGCCAAATTGACAAGAGCGAGAGGTATACTG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000555357.1; ENST00000555408.5; ENST00000554619.5; ENST00000556464.5; ENST00000440311.6; ENST00000266970.9; ENST00000553376.5; ENST00000354056.4
External Link RMBase: m6A_site_192291
mod ID: M6ASITE013256 Click to Show/Hide the Full List
mod site chr12:55966900-55966901:+ [4]
Sequence TCCCGACCCGGGGCCACGGTACTGGGCCCTGTTTCCCCCTC
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000354056.4; ENST00000266970.9; ENST00000555408.5; ENST00000554619.5; ENST00000440311.6; ENST00000555357.1; ENST00000556464.5; ENST00000553376.5
External Link RMBase: m6A_site_192292
mod ID: M6ASITE013257 Click to Show/Hide the Full List
mod site chr12:55967015-55967016:+ [2]
Sequence TCGCTGGCGCTTCATGGAGAACTTCCAAAAGGTGGAAAAGA
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; BGC823; MT4; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; MSC; iSLK; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000266970.9; ENST00000440311.6; ENST00000554619.5; ENST00000555408.5; ENST00000555357.1; ENST00000556464.5; ENST00000553376.5; ENST00000354056.4
External Link RMBase: m6A_site_192296
mod ID: M6ASITE013258 Click to Show/Hide the Full List
mod site chr12:55967063-55967064:+ [3]
Sequence GGGCACGTACGGAGTTGTGTACAAAGCCAGAAACAAGTTGA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000555408.5; ENST00000554619.5; ENST00000266970.9; ENST00000553376.5; ENST00000354056.4; ENST00000555357.1; ENST00000440311.6; ENST00000556464.5
External Link RMBase: m6A_site_192297
mod ID: M6ASITE013259 Click to Show/Hide the Full List
mod site chr12:55967075-55967076:+ [2]
Sequence AGTTGTGTACAAAGCCAGAAACAAGTTGACGGGAGAGGTGG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; hESC-HEK293T; BGC823; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; iSLK; NB4
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000555408.5; ENST00000555357.1; ENST00000266970.9; ENST00000354056.4; ENST00000556464.5; ENST00000440311.6; ENST00000553376.5; ENST00000554619.5
External Link RMBase: m6A_site_192298
mod ID: M6ASITE013260 Click to Show/Hide the Full List
mod site chr12:55967120-55967121:+ [5]
Sequence GCTTAAGAAAATCCGCCTGGACACGTGAGTGGCCTCTGTAC
Motif Score 3.643047619
Cell/Tissue List HepG2; hESC-HEK293T; peripheral-blood
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000554619.5; ENST00000553376.5; ENST00000555357.1; ENST00000440311.6; ENST00000555408.5; ENST00000266970.9; ENST00000354056.4; ENST00000556464.5
External Link RMBase: m6A_site_192299
mod ID: M6ASITE013261 Click to Show/Hide the Full List
mod site chr12:55967146-55967147:+ [6]
Sequence GAGTGGCCTCTGTACCCGGGACTCCTAACTGGGGACCTCCT
Motif Score 4.065041667
Cell/Tissue List HepG2; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000553376.5; ENST00000440311.6; ENST00000266970.9; ENST00000554619.5; ENST00000555408.5; ENST00000556464.5; ENST00000354056.4; ENST00000555357.1
External Link RMBase: m6A_site_192300
mod ID: M6ASITE013262 Click to Show/Hide the Full List
mod site chr12:55967160-55967161:+ [6]
Sequence CCCGGGACTCCTAACTGGGGACCTCCTTGATTGTCCCCCCC
Motif Score 3.622404762
Cell/Tissue List HepG2; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000556464.5; ENST00000555408.5; ENST00000555357.1; ENST00000440311.6; ENST00000354056.4; ENST00000553376.5; ENST00000266970.9; ENST00000554619.5
External Link RMBase: m6A_site_192301
mod ID: M6ASITE013263 Click to Show/Hide the Full List
mod site chr12:55967878-55967879:+ [4]
Sequence AGACTGAGGGTGTGCCCAGTACTGCCATCCGAGAGATCTCT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000440311.6; ENST00000555357.1; ENST00000556276.5; ENST00000553376.5; ENST00000556656.5; ENST00000556146.1; ENST00000354056.4; ENST00000555408.5; ENST00000266970.9; ENST00000554619.5; ENST00000556464.5
External Link RMBase: m6A_site_192302
mod ID: M6ASITE013264 Click to Show/Hide the Full List
mod site chr12:55968065-55968066:+ [3]
Sequence TAGGCTGCTGGATGTCATTCACACAGAAAATAAACTCTACC
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000556656.5; ENST00000354056.4; ENST00000556464.5; ENST00000266970.9; ENST00000554619.5; ENST00000555408.5; ENST00000555357.1; ENST00000556276.5; ENST00000553376.5; ENST00000556146.1; ENST00000440311.6
External Link RMBase: m6A_site_192303
mod ID: M6ASITE013265 Click to Show/Hide the Full List
mod site chr12:55968868-55968869:+ [3]
Sequence ACCTCAGAATCTGCTTATTAACACAGAGGGGGCCATCAAGC
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000354056.4; ENST00000266970.9; ENST00000556276.5; ENST00000556656.5; ENST00000440311.6; ENST00000554619.5; ENST00000556146.1; ENST00000556464.5; ENST00000555408.5; ENST00000553376.5
External Link RMBase: m6A_site_192304
mod ID: M6ASITE013266 Click to Show/Hide the Full List
mod site chr12:55968895-55968896:+ [4]
Sequence GGGGGCCATCAAGCTAGCAGACTTTGGACTAGCCAGAGCTT
Motif Score 3.319380952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000556656.5; ENST00000553376.5; ENST00000440311.6; ENST00000555408.5; ENST00000354056.4; ENST00000556276.5; ENST00000556464.5; ENST00000266970.9; ENST00000556146.1; ENST00000554619.5
External Link RMBase: m6A_site_192305
mod ID: M6ASITE013267 Click to Show/Hide the Full List
mod site chr12:55968933-55968934:+ [4]
Sequence CTTTTGGAGTCCCTGTTCGTACTTACACCCATGAGGTGAGT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000554619.5; ENST00000354056.4; ENST00000266970.9; ENST00000556656.5; ENST00000440311.6; ENST00000556276.5; ENST00000556146.1; ENST00000556464.5; ENST00000553376.5; ENST00000555408.5
External Link RMBase: m6A_site_192306
mod ID: M6ASITE013268 Click to Show/Hide the Full List
mod site chr12:55968937-55968938:+ [3]
Sequence TGGAGTCCCTGTTCGTACTTACACCCATGAGGTGAGTCCCT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000556146.1; ENST00000556464.5; ENST00000556276.5; ENST00000440311.6; ENST00000354056.4; ENST00000556656.5; ENST00000554619.5; ENST00000555408.5; ENST00000266970.9; ENST00000553376.5
External Link RMBase: m6A_site_192307
mod ID: M6ASITE013269 Click to Show/Hide the Full List
mod site chr12:55969541-55969542:+ [3]
Sequence ATATTATTCCACAGCTGTGGACATCTGGAGCCTGGGCTGCA
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000554619.5; ENST00000555408.5; ENST00000553376.5; ENST00000354056.4; ENST00000266970.9; ENST00000556656.5; ENST00000440311.6; ENST00000556276.5; ENST00000556146.1; ENST00000556464.5
External Link RMBase: m6A_site_192308
mod ID: M6ASITE013270 Click to Show/Hide the Full List
mod site chr12:55971161-55971162:+ [3]
Sequence AGTTACTTCTATGCCTGATTACAAGCCAAGTTTCCCCAAGT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000555408.5; ENST00000553376.5; ENST00000354056.4; ENST00000440311.6; ENST00000554545.1; ENST00000266970.9; ENST00000556656.5
External Link RMBase: m6A_site_192310
mod ID: M6ASITE013271 Click to Show/Hide the Full List
mod site chr12:55971210-55971211:+ [4]
Sequence CAAGATTTTAGTAAAGTTGTACCTCCCCTGGATGAAGATGG
Motif Score 2.8355
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000555408.5; ENST00000440311.6; ENST00000554545.1; ENST00000354056.4; ENST00000266970.9; ENST00000556656.5; ENST00000553376.5
External Link RMBase: m6A_site_192311
mod ID: M6ASITE013272 Click to Show/Hide the Full List
mod site chr12:55971321-55971322:+ [2]
Sequence CAGGATGAAGGAAGGATGAGACCCTGAAATCTGGGCCTCAG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000555408.5; ENST00000556656.5; ENST00000440311.6; ENST00000554545.1; ENST00000553376.5; ENST00000354056.4; ENST00000266970.9
External Link RMBase: m6A_site_192312
mod ID: M6ASITE013273 Click to Show/Hide the Full List
mod site chr12:55971457-55971458:+ [7]
Sequence TGGTTTCCTGATTTCTGGGAACACCTGCTGCCCATTTAGTC
Motif Score 2.951386905
Cell/Tissue List HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000554545.1; ENST00000553376.5; ENST00000556656.5; ENST00000440311.6; ENST00000354056.4; ENST00000555408.5; ENST00000266970.9
External Link RMBase: m6A_site_192313
mod ID: M6ASITE013274 Click to Show/Hide the Full List
mod site chr12:55971542-55971543:+ [3]
Sequence AATGCTGCACTACGACCCTAACAAGCGGATTTCGGCCAAGG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000266970.9; ENST00000440311.6; ENST00000556656.5; ENST00000553376.5; ENST00000354056.4; ENST00000554545.1; ENST00000555408.5
External Link RMBase: m6A_site_192314
mod ID: M6ASITE013275 Click to Show/Hide the Full List
mod site chr12:55971706-55971707:+ [2]
Sequence CTTGGCCTTGGGCTATTTGGACTCAGGTGGGCCCTCTGAAC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000440311.6; ENST00000266970.9; ENST00000553376.5; ENST00000354056.4; ENST00000555408.5; ENST00000554545.1
External Link RMBase: m6A_site_192315
mod ID: M6ASITE013276 Click to Show/Hide the Full List
mod site chr12:55971725-55971726:+ [2]
Sequence GACTCAGGTGGGCCCTCTGAACTTGCCTTAAACACTCACCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000555408.5; ENST00000554545.1; ENST00000440311.6; ENST00000354056.4; ENST00000553376.5; ENST00000266970.9
External Link RMBase: m6A_site_192316
mod ID: M6ASITE013277 Click to Show/Hide the Full List
mod site chr12:55971736-55971737:+ [2]
Sequence GCCCTCTGAACTTGCCTTAAACACTCACCTTCTAGTCTTGG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000440311.6; ENST00000555408.5; ENST00000554545.1; ENST00000354056.4; ENST00000553376.5; ENST00000266970.9
External Link RMBase: m6A_site_192317
mod ID: M6ASITE013278 Click to Show/Hide the Full List
mod site chr12:55971794-55971795:+ [2]
Sequence TACAGGGGTGAAAGGGGGGAACCAGTGAAAATGAAAGGAAG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1B; H1A; hESCs; GM12878; LCLs; H1299; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000354056.4; ENST00000266970.9; ENST00000555408.5; ENST00000554545.1; ENST00000553376.5
External Link RMBase: m6A_site_192319
mod ID: M6ASITE013279 Click to Show/Hide the Full List
mod site chr12:55971831-55971832:+ [4]
Sequence GAAGTTTCAGTATTAGATGCACTTAAGTTAGCCTCCACCAC
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000553376.5; ENST00000266970.9; ENST00000555408.5; ENST00000354056.4; ENST00000554545.1
External Link RMBase: m6A_site_192320
mod ID: M6ASITE013280 Click to Show/Hide the Full List
mod site chr12:55971920-55971921:+ [4]
Sequence AATTTTAAAAAAGCCTTCCTACACGTTAGATTTGCCGTACC
Motif Score 2.078666667
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000553376.5; ENST00000555408.5; ENST00000266970.9
External Link RMBase: m6A_site_192321
mod ID: M6ASITE013281 Click to Show/Hide the Full List
mod site chr12:55971922-55971923:+ [4]
Sequence TTTTAAAAAAGCCTTCCTACACGTTAGATTTGCCGTACCAA
Motif Score 2.058863095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000555408.5; ENST00000266970.9; ENST00000553376.5
External Link RMBase: m6A_site_192322
mod ID: M6ASITE013282 Click to Show/Hide the Full List
mod site chr12:55971985-55971986:+ [4]
Sequence TATTTCCAGTGTTTGGGATGACCAGGATCCCAAGCCTCCTG
Motif Score 2.839113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000553376.5; ENST00000266970.9; ENST00000555408.5
External Link RMBase: m6A_site_192323
mod ID: M6ASITE013283 Click to Show/Hide the Full List
mod site chr12:55972011-55972012:+ [3]
Sequence ATCCCAAGCCTCCTGCTGCCACAATGTTTATAAAGGCCAAA
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000266970.9; ENST00000553376.5; ENST00000555408.5
External Link RMBase: m6A_site_192324
mod ID: M6ASITE013284 Click to Show/Hide the Full List
mod site chr12:55972064-55972065:+ [2]
Sequence CTAAGTTGGTGCTTTTGAGAACCAAGTAAAACAAAACCACT
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000266970.9; ENST00000555408.5; ENST00000553376.5
External Link RMBase: m6A_site_192325
mod ID: M6ASITE013285 Click to Show/Hide the Full List
mod site chr12:55972074-55972075:+ [2]
Sequence GCTTTTGAGAACCAAGTAAAACAAAACCACTGGGAGGAGTC
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000266970.9; ENST00000553376.5; ENST00000555408.5
External Link RMBase: m6A_site_192326
mod ID: M6ASITE013286 Click to Show/Hide the Full List
mod site chr12:55972079-55972080:+ [2]
Sequence TGAGAACCAAGTAAAACAAAACCACTGGGAGGAGTCTATTT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000266970.9; ENST00000553376.5; ENST00000555408.5
External Link RMBase: m6A_site_192327
mod ID: M6ASITE013287 Click to Show/Hide the Full List
mod site chr12:55972178-55972179:+ [4]
Sequence CTCACCTAATAGGCTGGGAGACTGAAGACTCAGCCCGGGTG
Motif Score 3.319380952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000555408.5; ENST00000266970.9
External Link RMBase: m6A_site_192328
mod ID: M6ASITE013288 Click to Show/Hide the Full List
mod site chr12:55972276-55972277:+ [8]
Sequence GGAATCTGGGAGGCCCTGAGACAGGGATTGTGCTTCATTCC
Motif Score 2.897386905
Cell/Tissue List HEK293
Seq Type List m6A-REF-seq
Transcript ID List ENST00000555408.5; ENST00000266970.9
External Link RMBase: m6A_site_192329
mod ID: M6ASITE013289 Click to Show/Hide the Full List
mod site chr12:55972413-55972414:+ [4]
Sequence CCTGATCCCATTTTCCTCTGACGTCCACCTCCTACCCCATA
Motif Score 2.833690476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000266970.9
External Link RMBase: m6A_site_192330
mod ID: M6ASITE013290 Click to Show/Hide the Full List
mod site chr12:55972476-55972477:+ [4]
Sequence GCATCATTTTGAGAATGCTGACACTTTTTCAGGGCTGTGAT
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000266970.9
External Link RMBase: m6A_site_192331
mod ID: M6ASITE013291 Click to Show/Hide the Full List
mod site chr12:55972478-55972479:+ [4]
Sequence ATCATTTTGAGAATGCTGACACTTTTTCAGGGCTGTGATTG
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000266970.9
External Link RMBase: m6A_site_192332
mod ID: M6ASITE013292 Click to Show/Hide the Full List
mod site chr12:55972541-55972542:+ [4]
Sequence TTTCTTTAAAAGAAGGATGAACAATTATATTTATATTTCAG
Motif Score 2.951386905
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000266970.9
External Link RMBase: m6A_site_192333
mod ID: M6ASITE013293 Click to Show/Hide the Full List
mod site chr12:55972653-55972654:+ [4]
Sequence CACCTTGGGGTTTTGTAATGACAGTGCTAAAAAAAAAAAGC
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000266970.9
External Link RMBase: m6A_site_192334
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000016 Click to Show/Hide the Full List
mod site chr12:55971834-55971835:+ [9]
Sequence GTTTCAGTATTAGATGCACTTAAGTTAGCCTCCACCACCCT
Transcript ID List ENST00000553376.5; ENST00000554545.1; ENST00000266970.9; ENST00000354056.4; ENST00000555408.5
External Link RMBase: Pseudo_site_1146