Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00021)
Target Name TRNA-Thr (anticodon CGT) 1-1 (TRT-CGT1-1)
Synonyms
tRNA-Thr-CGT-1-1; TRNAT5; transfer RNA threonine 5 (anticodon CGU); transfer RNA-Thr (CGT) 1-1
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Gene Name TRT-CGT1-1
Family Cytoplasmic transfer RNAs
Gene ID 100189035
HGNC ID HGNC:34594
Chromosomal Location 6p22.1
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00021)
TRNA-Thr (anticodon CGT) 1-1 (TRT-CGT1-1)
N1-methyladenosine (m1A)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M1ASITE000100 Click to Show/Hide the Full List
mod site chr6:28489007-28489008:- [1]
Sequence AACAGGAGATCCTGGGTTCGACTCCCAGTGGGGCCTGATGT
Cell/Tissue List HEK293T
Seq Type List m1A-MAP-seq; m1A-seq
Transcript ID List chr6.trna126; rmsk_1902327
External Link RMBase: m1A_site_858
5-methylcytidine (m5C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003796 Click to Show/Hide the Full List
mod site chr6:28489016-28489017:- [2]
Sequence TGTCTCGTAAACAGGAGATCCTGGGTTCGACTCCCAGTGGG
Transcript ID List chr6.trna126; rmsk_1902327
External Link RMBase: m5C_site_37207
mod ID: M5CSITE003797 Click to Show/Hide the Full List
mod site chr6:28489038-28489039:- [2]
Sequence TGGCTTAGTTGGTTAAAGCGCCTGTCTCGTAAACAGGAGAT
Transcript ID List chr6.trna126; rmsk_1902327
External Link RMBase: m5C_site_37208