General Information of the Epigenetic Target (ID: EPITAR00013)
Target Name Secreted frizzled related protein 1 (SFRP1)
Synonyms
SARP2; FRP; FRP-1
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Gene Name SFRP1
Sequence
MGIGRSEGGRRGAALGVLLALGAALLAVGSASEYDYVSFQSDIGPYQSGRFYTKPPQCVDIPADLRLCHNVGYKKMVLPNLLEHETMAEVKQQASSWVPLLNKNCHAGTQVFLCSLFAPVCLDRPIYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKCDKFPEGDVCIAMTPPNATEASKPQGTTVCPPCDNELKSEAIIEHLCASEFALRMKIKEVKKENGDKKIVPKKKKPLKLGPIKKKDLKKLVLYLKNGADCPCHQLDNLSHHFLIMGRKVKSQYLLTAIHKWDKKNKEFKNFMKKMKNHECPTFQSVFK
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Family Secreted frizzled-related protein (sFRP) family
Function
Soluble frizzled-related proteins (sFRPS) function as modulators of Wnt signaling through direct interaction with Wnts. They have a role in regulating cell growth and differentiation in specific cell types. SFRP1 decreases intracellular beta-catenin levels (By similarity). Has antiproliferative effects on vascular cells, in vitro and in vivo, and can induce, in vivo, an angiogenic response. In vascular cell cycle, delays the G1 phase and entry into the S phase (By similarity). In kidney development, inhibits tubule formation and bud growth in metanephroi (By similarity). Inhibits WNT1/WNT4-mediated TCF-dependent transcription.
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Gene ID 6422
HGNC ID HGNC:10776
Ensembl Gene ID ENSG00000104332
KEGG ID hsa:6422
Chromosomal Location 8p11.21
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00013)
Secreted frizzled related protein 1 (SFRP1)
5-methylcytidine (m5C)
In total 2 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004276 Click to Show/Hide the Full List
mod site chr8:41309202-41309203:-
Sequence GGACGCGCGCGGGGAGGCGGCGGAGGCAGCCCCGACGTCGC
Cell/Tissue List testis
Seq Type List Bisulfite-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m5C_site_41264
mod ID: M5CSITE004277 Click to Show/Hide the Full List
mod site chr8:41309205-41309206:-
Sequence GCAGGACGCGCGCGGGGAGGCGGCGGAGGCAGCCCCGACGT
Cell/Tissue List testis
Seq Type List Bisulfite-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m5C_site_41265
N6-methyladenosine (m6A)
In total 34 m6A sequence/site(s) in this target gene
mod ID: M6ASITE084673 Click to Show/Hide the Full List
mod site chr8:41262151-41262152:- [1]
Sequence TTTTAGATCCTAAGTCTCTTACAAAAGCTTTGAATACTGTG
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794977
mod ID: M6ASITE084674 Click to Show/Hide the Full List
mod site chr8:41262220-41262221:- [1]
Sequence GTTGCCAGCAGATACACAGGACATGGATGAAATTCCCGTTT
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794978
mod ID: M6ASITE084675 Click to Show/Hide the Full List
mod site chr8:41262494-41262495:- [1]
Sequence TTTTTAAAATATCCTGTGTAACACTTGGCTCTTGGTACCTG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794979
mod ID: M6ASITE084676 Click to Show/Hide the Full List
mod site chr8:41262792-41262793:- [2]
Sequence AAGGGAGGCTCTCTGTAGGCACAGAGCTGCACTATCACGAG
Motif Score 2.830589286
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794980
mod ID: M6ASITE084677 Click to Show/Hide the Full List
mod site chr8:41263784-41263785:- [3]
Sequence GAGAGAGTTTCAAAAGCAAAACATCTCTGCAGTTTTTCCCA
Motif Score 2.20572619
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794981
mod ID: M6ASITE084678 Click to Show/Hide the Full List
mod site chr8:41263894-41263895:- [2]
Sequence ATGGATCAAAGAAATTCAGAACAGCCTGCCTGTCCCCCCGC
Motif Score 2.951386905
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794982
mod ID: M6ASITE084679 Click to Show/Hide the Full List
mod site chr8:41263978-41263979:- [3]
Sequence ACCTAACACCCCCTAGCAAAACTCACAGAGCTTTCCGTTTT
Motif Score 2.627720238
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794983
mod ID: M6ASITE084680 Click to Show/Hide the Full List
mod site chr8:41263998-41263999:- [3]
Sequence GAGTCCGTGGTTGCCCTAGAACCTAACACCCCCTAGCAAAA
Motif Score 2.930744048
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794984
mod ID: M6ASITE084681 Click to Show/Hide the Full List
mod site chr8:41264342-41264343:- [3]
Sequence AGAAGGCAGTAGTTTTCAAAACACATAGTTAAAAAAGAAAC
Motif Score 2.20572619
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794985
mod ID: M6ASITE084682 Click to Show/Hide the Full List
mod site chr8:41264401-41264402:- [3]
Sequence CTTTGTGTCAGAAAAAGGAAACCACAGTGAGCCTGAGAGAG
Motif Score 2.185083333
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794986
mod ID: M6ASITE084683 Click to Show/Hide the Full List
mod site chr8:41264448-41264449:- [3]
Sequence GGCATGATCTGATCCCCAAGACATGTGGAGGGGCAGCCTGT
Motif Score 2.897386905
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794987
mod ID: M6ASITE084684 Click to Show/Hide the Full List
mod site chr8:41264853-41264854:- [3]
Sequence ACAGCAACACAGCCACTAAAACACAAAAAGGGGGATTGGGC
Motif Score 2.20572619
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794988
mod ID: M6ASITE084685 Click to Show/Hide the Full List
mod site chr8:41264883-41264884:- [3]
Sequence TGCACAGGAGGAGGTGACAAACCATTTCCAACAGCAACACA
Motif Score 2.185083333
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794989
mod ID: M6ASITE084686 Click to Show/Hide the Full List
mod site chr8:41264988-41264989:- [4]
Sequence CCTCCATAGCCACGCTCCAAACCCCAGGGTAGCCATGGCCG
Motif Score 2.185083333
Cell/Tissue List U2OS; hESCs; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794990
mod ID: M6ASITE084687 Click to Show/Hide the Full List
mod site chr8:41265055-41265056:- [4]
Sequence ACTGCGCCTGTCAGTAGTGGACATTGTAATCCAGTCGGCTT
Motif Score 3.643047619
Cell/Tissue List U2OS; H1B; hESCs; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794991
mod ID: M6ASITE084688 Click to Show/Hide the Full List
mod site chr8:41265097-41265098:- [4]
Sequence GGGGGGACAGTGCCCCGGGAACCCGGTGGGTCACACACACG
Motif Score 2.930744048
Cell/Tissue List U2OS; H1A; H1B; hESCs; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794992
mod ID: M6ASITE084689 Click to Show/Hide the Full List
mod site chr8:41265111-41265112:- [4]
Sequence GTGGGGTGGGAGCGGGGGGGACAGTGCCCCGGGAACCCGGT
Motif Score 3.643047619
Cell/Tissue List U2OS; H1A; H1B; hESCs; fibroblasts; A549; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794993
mod ID: M6ASITE084690 Click to Show/Hide the Full List
mod site chr8:41265203-41265204:- [5]
Sequence CTTCATGAAGAAAATGAAAAACCATGAGTGCCCCACCTTTC
Motif Score 2.185083333
Cell/Tissue List H1A; H1B; hNPCs; hESCs; fibroblasts; A549; HEK293T; HEK293A-TOA; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794994
mod ID: M6ASITE084691 Click to Show/Hide the Full List
mod site chr8:41265224-41265225:- [5]
Sequence GAAAAACAAGGAGTTCAAAAACTTCATGAAGAAAATGAAAA
Motif Score 2.627720238
Cell/Tissue List H1A; H1B; hNPCs; hESCs; fibroblasts; A549; HEK293T; HEK293A-TOA; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794995
mod ID: M6ASITE084692 Click to Show/Hide the Full List
mod site chr8:41265239-41265240:- [5]
Sequence CCACAAGTGGGACAAGAAAAACAAGGAGTTCAAAAACTTCA
Motif Score 2.20572619
Cell/Tissue List H1A; H1B; hNPCs; hESCs; fibroblasts; A549; HEK293T; HEK293A-TOA; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794996
mod ID: M6ASITE084693 Click to Show/Hide the Full List
mod site chr8:41265248-41265249:- [5]
Sequence GACGGCCATCCACAAGTGGGACAAGAAAAACAAGGAGTTCA
Motif Score 3.643047619
Cell/Tissue List H1A; H1B; hNPCs; hESCs; fibroblasts; A549; HEK293T; HEK293A-TOA; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794997
mod ID: M6ASITE084694 Click to Show/Hide the Full List
mod site chr8:41265267-41265268:- [6]
Sequence TGAAGAGCCAGTACTTGCTGACGGCCATCCACAAGTGGGAC
Motif Score 2.833690476
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000379845.3; ENST00000220772.8
External Link RMBase: m6A_site_794998
mod ID: M6ASITE084695 Click to Show/Hide the Full List
mod site chr8:41265326-41265327:- [5]
Sequence CTGTCCCTGCCACCAGCTGGACAACCTCAGCCACCACTTCC
Motif Score 3.643047619
Cell/Tissue List H1A; H1B; hNPCs; hESCs; fibroblasts; A549; HEK293T; HEK293A-TOA; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_794999
mod ID: M6ASITE084696 Click to Show/Hide the Full List
mod site chr8:41265386-41265387:- [7]
Sequence GGGGCCCATCAAGAAGAAGGACCTGAAGAAGCTTGTGCTGT
Motif Score 3.622404762
Cell/Tissue List hNPCs; hESCs; fibroblasts; A549; HEK293A-TOA; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_795000
mod ID: M6ASITE084697 Click to Show/Hide the Full List
mod site chr8:41303482-41303483:- [7]
Sequence AAATCTGAGGCCATCATTGAACATCTCTGTGCCAGCGAGTT
Motif Score 2.951386905
Cell/Tissue List hNPCs; fibroblasts; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8; ENST00000379845.3
External Link RMBase: m6A_site_795001
mod ID: M6ASITE084698 Click to Show/Hide the Full List
mod site chr8:41308791-41308792:- [5]
Sequence CTTCGCGCCCGTCTGCCTGGACCGGCCCATCTACCCGTGTC
Motif Score 3.622404762
Cell/Tissue List H1A; H1B; hESCs; A549; HEK293T; HEK293A-TOA; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795002
mod ID: M6ASITE084699 Click to Show/Hide the Full List
mod site chr8:41308848-41308849:- [8]
Sequence GGTGCCCCTGCTCAACAAGAACTGCCACGCCGGCACCCAGG
Motif Score 3.373380952
Cell/Tissue List A549; H1A; H1B; hNPCs; hESCs; HEK293T; HEK293A-TOA; MSC; endometrial
Seq Type List MeRIP-seq; m6A-seq; m6A-CLIP/IP
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795003
mod ID: M6ASITE084700 Click to Show/Hide the Full List
mod site chr8:41308903-41308904:- [8]
Sequence CCAACCTGCTGGAGCACGAGACCATGGCGGAGGTGAAGCAG
Motif Score 2.876744048
Cell/Tissue List A549; H1A; H1B; hNPCs; hESCs; HEK293T; HEK293A-TOA; MSC; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795004
mod ID: M6ASITE084701 Click to Show/Hide the Full List
mod site chr8:41308968-41308969:- [4]
Sequence GTGCGTGGACATCCCCGCGGACCTGCGGCTGTGCCACAACG
Motif Score 3.622404762
Cell/Tissue List U2OS; H1A; H1B; hNPCs; hESCs; A549; HEK293T; HEK293A-TOA; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795005
mod ID: M6ASITE084702 Click to Show/Hide the Full List
mod site chr8:41308980-41308981:- [4]
Sequence CAAGCCACCTCAGTGCGTGGACATCCCCGCGGACCTGCGGC
Motif Score 3.643047619
Cell/Tissue List U2OS; H1A; H1B; hNPCs; hESCs; A549; HEK293T; HEK293A-TOA; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795006
mod ID: M6ASITE084703 Click to Show/Hide the Full List
mod site chr8:41309034-41309035:- [4]
Sequence CTACGTGAGCTTCCAGTCGGACATCGGCCCGTACCAGAGCG
Motif Score 3.643047619
Cell/Tissue List U2OS; HEK293T; HEK293A-TOA; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795007
mod ID: M6ASITE084704 Click to Show/Hide the Full List
mod site chr8:41309176-41309177:- [4]
Sequence CAGCCCCGACGTCGCGGAGAACAGGGCGCAGAGCCGGCATG
Motif Score 2.951386905
Cell/Tissue List U2OS; H1B; HEK293T; HEK293A-TOA; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795008
mod ID: M6ASITE084705 Click to Show/Hide the Full List
mod site chr8:41309264-41309265:- [5]
Sequence GGAGCCGGGCAACGCTGGGGACTGCGCCTTTTGTCCCCGGA
Motif Score 4.065041667
Cell/Tissue List H1B; HEK293T; HEK293A-TOA; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795009
mod ID: M6ASITE084706 Click to Show/Hide the Full List
mod site chr8:41309307-41309308:- [5]
Sequence GGCCGCCACTGGCCGGGGGGACCGGGCAGCAGCTTGCGGCC
Motif Score 3.622404762
Cell/Tissue List H1B; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000220772.8
External Link RMBase: m6A_site_795010