Epigenetic Target Information

General Information of the Epigenetic Target (ID: EPITAR00011)
Target Name NF-kappaB interacting lncRNA (NKILA)
Synonyms
NF-kappaB interacting long non-coding RNA
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Gene Name NKILA
Family Long non-coding RNAs with non-systematic symbols
Gene ID 105416157
HGNC ID HGNC:51599
Ensembl Gene ID ENSG00000278709
Chromosomal Location 20q13.31
RNA Modification Sequencing Data Associated with the Target (ID: EPITAR00011)
NF-kappaB interacting lncRNA (NKILA)
N6-methyladenosine (m6A)
In total 33 m6A sequence/site(s) in this target gene
mod ID: M6ASITE053830 Click to Show/Hide the Full List
mod site chr20:57710184-57710185:+ [1]
Sequence GAGCTAGGCGGCCCACGTAGACCCGGCACCCGCGCAACGGA
Motif Score 2.876744048
Cell/Tissue List HeLa; A549
Seq Type List m6A-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538125
mod ID: M6ASITE053831 Click to Show/Hide the Full List
mod site chr20:57710284-57710285:+ [1]
Sequence GCCCGGGGCCGGGGAGCCGAACTCGGTGCCAGCCGCACCCG
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; GSC-11; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538126
mod ID: M6ASITE053832 Click to Show/Hide the Full List
mod site chr20:57710481-57710482:+ [1]
Sequence ATTGCCTGGTTTCGCAGGAGACTGTCCGCCTTCAGTTCTCC
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; U2OS; A549; GSC-11; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538128
mod ID: M6ASITE053833 Click to Show/Hide the Full List
mod site chr20:57710529-57710530:+ [1]
Sequence CGGGGATCATGGCCCACTGAACCCCCAAGCGCTTTCACCCG
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; U2OS; A549; GSC-11; HEK293A-TOA; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538131
mod ID: M6ASITE053834 Click to Show/Hide the Full List
mod site chr20:57710551-57710552:+ [1]
Sequence CCCCAAGCGCTTTCACCCGAACCCAAGGAGGACGACCAGGA
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; U2OS; A549; GSC-11; HEK293A-TOA; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538132
mod ID: M6ASITE053835 Click to Show/Hide the Full List
mod site chr20:57710581-57710582:+ [1]
Sequence GACGACCAGGAAAGACGGGAACTCGCGTAGACACGCCCGGA
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; GSC-11; HEK293A-TOA; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538133
mod ID: M6ASITE053836 Click to Show/Hide the Full List
mod site chr20:57710591-57710592:+ [1]
Sequence AAAGACGGGAACTCGCGTAGACACGCCCGGAAGCCCTTGTC
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1A; GSC-11; HEK293A-TOA; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538134
mod ID: M6ASITE053837 Click to Show/Hide the Full List
mod site chr20:57710631-57710632:+ [1]
Sequence CATGTAAATAGCTGTCGGGGACTGGTGTATTGTCGCCGCCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1B; H1A; GSC-11; HEK293A-TOA; iSLK; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538135
mod ID: M6ASITE053838 Click to Show/Hide the Full List
mod site chr20:57710663-57710664:+ [1]
Sequence TCGCCGCCCCAGCCGGCGGGACCTGGGGCGAATCCACACCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1B; MM6; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538136
mod ID: M6ASITE053839 Click to Show/Hide the Full List
mod site chr20:57710803-57710804:+ [1]
Sequence ATTACAGGAGTGCTACAAGAACACATTCTTCAGGTTTAAAA
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; U2OS; H1A; H1B; A549; HEK293A-TOA; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538137
mod ID: M6ASITE053840 Click to Show/Hide the Full List
mod site chr20:57710848-57710849:+ [2]
Sequence ATTAAAATATTACATAAGAGACCTCCCCTCCCTGGCCCACC
Motif Score 2.876744048
Cell/Tissue List HEK293T; HeLa; U2OS; A549
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538138
mod ID: M6ASITE053841 Click to Show/Hide the Full List
mod site chr20:57710905-57710906:+ [2]
Sequence TTTAGTGTGTCGCCTTTTAGACACTTTCTCAAAGCTTCACT
Motif Score 2.897386905
Cell/Tissue List HEK293T; HeLa; U2OS; A549; HEK293A-TOA; iSLK
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538139
mod ID: M6ASITE053842 Click to Show/Hide the Full List
mod site chr20:57710966-57710967:+ [2]
Sequence AGCACCTACCTGTGCCAGAAACTCTCCAAATATTAACTCAA
Motif Score 2.627720238
Cell/Tissue List HEK293T; HeLa; U2OS; A549; HEK293A-TOA; iSLK; MSC
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538140
mod ID: M6ASITE053843 Click to Show/Hide the Full List
mod site chr20:57711105-57711106:+ [1]
Sequence AGCCTGTGTGCCAACCCAGGACCCTGGGGAGCTGCCTCCCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; U2OS; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538141
mod ID: M6ASITE053844 Click to Show/Hide the Full List
mod site chr20:57711200-57711201:+ [1]
Sequence AGTTTCAGTAATTAGCAGGGACTTAGTGTGTTCAGAGAAAA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; U2OS
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2; ENST00000613231.1
External Link RMBase: m6A_site_538142
mod ID: M6ASITE053845 Click to Show/Hide the Full List
mod site chr20:57711317-57711318:+ [1]
Sequence GAAGGTGGCCTCGGGGTAGAACTTACCTAGACCAGAGCGAA
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; U2OS; H1A; H1B; A549; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538143
mod ID: M6ASITE053846 Click to Show/Hide the Full List
mod site chr20:57711327-57711328:+ [1]
Sequence TCGGGGTAGAACTTACCTAGACCAGAGCGAATTCATCCTGA
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; U2OS; H1A; H1B; A549; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538144
mod ID: M6ASITE053847 Click to Show/Hide the Full List
mod site chr20:57711351-57711352:+ [1]
Sequence GAGCGAATTCATCCTGAAGAACTCAGAGAAAGCCGGTGCAG
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; U2OS; H1A; H1B; A549; MM6; HEK293A-TOA; iSLK; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000613231.1; ENST00000614771.2
External Link RMBase: m6A_site_538145
mod ID: M6ASITE053848 Click to Show/Hide the Full List
mod site chr20:57711433-57711434:+ [1]
Sequence GCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTGGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; A549; HEK293T; U2OS; H1A; H1B; MM6; GSC-11; HEK293A-TOA; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538147
mod ID: M6ASITE053849 Click to Show/Hide the Full List
mod site chr20:57711604-57711605:+ [1]
Sequence ACAGCCAGCACTAGGTCAGGACCCAGGCCCCGGCCCAGGAG
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; U2OS; H1B; GSC-11; HEK293A-TOA; iSLK; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538152
mod ID: M6ASITE053850 Click to Show/Hide the Full List
mod site chr20:57711669-57711670:+ [1]
Sequence CAGATGGCACCCTGCTGTGAACTGGGCGCCCTCAGCCCCTG
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; U2OS; iSLK; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538153
mod ID: M6ASITE053851 Click to Show/Hide the Full List
mod site chr20:57712124-57712125:+ [3]
Sequence TAATTCAGTGGCTTAAAGAAACCAAACCTACCCACAACGCT
Motif Score 2.185083333
Cell/Tissue List U2OS
Seq Type List MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538154
mod ID: M6ASITE053852 Click to Show/Hide the Full List
mod site chr20:57712129-57712130:+ [2]
Sequence CAGTGGCTTAAAGAAACCAAACCTACCCACAACGCTTGACC
Motif Score 2.185083333
Cell/Tissue List HeLa; U2OS; A549
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538155
mod ID: M6ASITE053853 Click to Show/Hide the Full List
mod site chr20:57712286-57712287:+ [1]
Sequence GAGCTTAATGCAGTGTTCAGACCTCAGGGTCCGAACCTGAG
Motif Score 2.876744048
Cell/Tissue List HeLa; U2OS; A549
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538156
mod ID: M6ASITE053854 Click to Show/Hide the Full List
mod site chr20:57712300-57712301:+ [1]
Sequence GTTCAGACCTCAGGGTCCGAACCTGAGGGTCACCCAAAGAT
Motif Score 2.930744048
Cell/Tissue List HeLa; U2OS; A549
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538157
mod ID: M6ASITE053855 Click to Show/Hide the Full List
mod site chr20:57712328-57712329:+ [1]
Sequence GTCACCCAAAGATGAGTGGGACATAGCTGTGTGACCTCGGC
Motif Score 3.643047619
Cell/Tissue List HeLa; U2OS; A549; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538158
mod ID: M6ASITE053856 Click to Show/Hide the Full List
mod site chr20:57712532-57712533:+ [1]
Sequence GGCAACCCCGGGAGGGAGGAACCACTATCATTTTATTTTCC
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; U2OS; A549; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538159
mod ID: M6ASITE053857 Click to Show/Hide the Full List
mod site chr20:57712568-57712569:+ [1]
Sequence TTTCCATTTTGCAGTTGAGGACAATGATGATTCCAGCACAG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; U2OS; A549; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538160
mod ID: M6ASITE053858 Click to Show/Hide the Full List
mod site chr20:57712589-57712590:+ [1]
Sequence CAATGATGATTCCAGCACAGACAGGGCCCCTGACGGGGCAG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; U2OS; HEK293A-TOA; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538161
mod ID: M6ASITE053859 Click to Show/Hide the Full List
mod site chr20:57712648-57712649:+ [1]
Sequence TTGGAAGGAGCATAGGCTGGACTGCCAGCACTCATAGGAGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; U2OS; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538162
mod ID: M6ASITE053860 Click to Show/Hide the Full List
mod site chr20:57712686-57712687:+ [1]
Sequence AGGCTTCGTGTGTGCCCAGGACTGCGAGAATTAAATACAGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; U2OS; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538163
mod ID: M6ASITE053861 Click to Show/Hide the Full List
mod site chr20:57712707-57712708:+ [1]
Sequence CTGCGAGAATTAAATACAGGACACCCAGTTCAGTTTGAATT
Motif Score 3.643047619
Cell/Tissue List HeLa; A549; U2OS; HEK293A-TOA; iSLK; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538164
mod ID: M6ASITE053862 Click to Show/Hide the Full List
mod site chr20:57712736-57712737:+ [1]
Sequence TCAGTTTGAATTTCAGATAAACTATGAATAATGATTAGTGT
Motif Score 2.627720238
Cell/Tissue List HeLa; A549; U2OS; HEK293A-TOA; MSC; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000614771.2
External Link RMBase: m6A_site_538165